Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp43Q8BUM9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp43Q8BUM9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp43Q8BUM9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp43Q8BUM9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp43Q8BUM9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Usp43Q8BUM9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Usp43Q8BUM9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp43Q8BUM9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp43Q8BUM9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Usp43Q8BUM9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Usp43Q8BUM9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Usp43Q8BUM9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp43Q8BUM9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Usp43Q8BUM9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp43Q8BUM9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp43Q8BUM9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Usp43Q8BUM9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Mir5133-201ENSMUST00000174955 77 ntBASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Grk6-206ENSMUST00000224995 2971 ntBASIC18.48■□□□□ 0.55
Usp43Q8BUM9 Tgds-204ENSMUST00000228543 1594 ntBASIC18.47■□□□□ 0.55
Usp43Q8BUM9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp43Q8BUM9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.47■□□□□ 0.55
Usp43Q8BUM9 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.47■□□□□ 0.55
Usp43Q8BUM9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp43Q8BUM9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp43Q8BUM9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp43Q8BUM9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp43Q8BUM9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp43Q8BUM9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp43Q8BUM9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp43Q8BUM9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Usp43Q8BUM9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp43Q8BUM9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp43Q8BUM9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.46■□□□□ 0.55
Usp43Q8BUM9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp43Q8BUM9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp43Q8BUM9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Usp43Q8BUM9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp43Q8BUM9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp43Q8BUM9 Gm12933-201ENSMUST00000120203 872 ntBASIC18.46■□□□□ 0.55
Usp43Q8BUM9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.46■□□□□ 0.55
Usp43Q8BUM9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Usp43Q8BUM9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp43Q8BUM9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp43Q8BUM9 Fst-202ENSMUST00000223640 2612 ntBASIC18.46■□□□□ 0.55
Usp43Q8BUM9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Usp43Q8BUM9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp43Q8BUM9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp43Q8BUM9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Usp43Q8BUM9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp43Q8BUM9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp43Q8BUM9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp43Q8BUM9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Usp43Q8BUM9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.45■□□□□ 0.54
Usp43Q8BUM9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp43Q8BUM9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp43Q8BUM9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp43Q8BUM9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp43Q8BUM9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp43Q8BUM9 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.45■□□□□ 0.54
Usp43Q8BUM9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp43Q8BUM9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp43Q8BUM9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.44■□□□□ 0.54
Usp43Q8BUM9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp43Q8BUM9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp43Q8BUM9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.44■□□□□ 0.54
Usp43Q8BUM9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp43Q8BUM9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Usp43Q8BUM9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.44■□□□□ 0.54
Usp43Q8BUM9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Usp43Q8BUM9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp43Q8BUM9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.44■□□□□ 0.54
Usp43Q8BUM9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Usp43Q8BUM9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Usp43Q8BUM9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp43Q8BUM9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp43Q8BUM9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp43Q8BUM9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp43Q8BUM9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp43Q8BUM9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp43Q8BUM9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.43■□□□□ 0.54
Usp43Q8BUM9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp43Q8BUM9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms