Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr7Q8BU04 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr7Q8BU04 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.49■□□□□ 0.55
Ubr7Q8BU04 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ubr7Q8BU04 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ubr7Q8BU04 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr7Q8BU04 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.48■□□□□ 0.55
Ubr7Q8BU04 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr7Q8BU04 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ubr7Q8BU04 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr7Q8BU04 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.48■□□□□ 0.55
Ubr7Q8BU04 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.48■□□□□ 0.55
Ubr7Q8BU04 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.48■□□□□ 0.55
Ubr7Q8BU04 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr7Q8BU04 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr7Q8BU04 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ubr7Q8BU04 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr7Q8BU04 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr7Q8BU04 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr7Q8BU04 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr7Q8BU04 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr7Q8BU04 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.47■□□□□ 0.55
Ubr7Q8BU04 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr7Q8BU04 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr7Q8BU04 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr7Q8BU04 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr7Q8BU04 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.47■□□□□ 0.55
Ubr7Q8BU04 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr7Q8BU04 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.47■□□□□ 0.55
Ubr7Q8BU04 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.47■□□□□ 0.55
Ubr7Q8BU04 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr7Q8BU04 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr7Q8BU04 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr7Q8BU04 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.47■□□□□ 0.55
Ubr7Q8BU04 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr7Q8BU04 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr7Q8BU04 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ubr7Q8BU04 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ubr7Q8BU04 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.46■□□□□ 0.55
Ubr7Q8BU04 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr7Q8BU04 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr7Q8BU04 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr7Q8BU04 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.46■□□□□ 0.55
Ubr7Q8BU04 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr7Q8BU04 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.46■□□□□ 0.55
Ubr7Q8BU04 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ubr7Q8BU04 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.45■□□□□ 0.54
Ubr7Q8BU04 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr7Q8BU04 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ubr7Q8BU04 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ubr7Q8BU04 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr7Q8BU04 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ubr7Q8BU04 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr7Q8BU04 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr7Q8BU04 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr7Q8BU04 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ubr7Q8BU04 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr7Q8BU04 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr7Q8BU04 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr7Q8BU04 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr7Q8BU04 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.44■□□□□ 0.54
Ubr7Q8BU04 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.44■□□□□ 0.54
Ubr7Q8BU04 Mir7071-201ENSMUST00000184847 69 ntBASIC18.44■□□□□ 0.54
Ubr7Q8BU04 Gm10812-201ENSMUST00000099864 546 ntBASIC18.44■□□□□ 0.54
Ubr7Q8BU04 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr7Q8BU04 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr7Q8BU04 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.44■□□□□ 0.54
Ubr7Q8BU04 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ubr7Q8BU04 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr7Q8BU04 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr7Q8BU04 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr7Q8BU04 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr7Q8BU04 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Ubr7Q8BU04 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.43■□□□□ 0.54
Ubr7Q8BU04 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr7Q8BU04 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr7Q8BU04 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr7Q8BU04 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ubr7Q8BU04 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.42■□□□□ 0.54
Ubr7Q8BU04 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr7Q8BU04 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr7Q8BU04 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.42■□□□□ 0.54
Ubr7Q8BU04 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.42■□□□□ 0.54
Ubr7Q8BU04 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.42■□□□□ 0.54
Ubr7Q8BU04 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr7Q8BU04 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr7Q8BU04 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ubr7Q8BU04 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr7Q8BU04 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Ubr7Q8BU04 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubr7Q8BU04 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ubr7Q8BU04 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubr7Q8BU04 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubr7Q8BU04 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Ubr7Q8BU04 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.41■□□□□ 0.54
Ubr7Q8BU04 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.41■□□□□ 0.54
Ubr7Q8BU04 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ubr7Q8BU04 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.41■□□□□ 0.54
Ubr7Q8BU04 Gm10138-203ENSMUST00000206952 366 ntBASIC18.41■□□□□ 0.54
Ubr7Q8BU04 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms