Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5rap1Q8BTW8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5rap1Q8BTW8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5rap1Q8BTW8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap1Q8BTW8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap1Q8BTW8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap1Q8BTW8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap1Q8BTW8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap1Q8BTW8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.29■□□□□ 0.36
Cdk5rap1Q8BTW8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap1Q8BTW8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap1Q8BTW8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap1Q8BTW8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap1Q8BTW8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap1Q8BTW8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cdk5rap1Q8BTW8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap1Q8BTW8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap1Q8BTW8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5rap1Q8BTW8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cdk5rap1Q8BTW8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cdk5rap1Q8BTW8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap1Q8BTW8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cdk5rap1Q8BTW8 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.28■□□□□ 0.36
Cdk5rap1Q8BTW8 Gm15378-201ENSMUST00000121894 207 ntBASIC17.28■□□□□ 0.36
Cdk5rap1Q8BTW8 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.28■□□□□ 0.36
Cdk5rap1Q8BTW8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdk5rap1Q8BTW8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap1Q8BTW8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdk5rap1Q8BTW8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap1Q8BTW8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap1Q8BTW8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap1Q8BTW8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap1Q8BTW8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdk5rap1Q8BTW8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap1Q8BTW8 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.27■□□□□ 0.36
Cdk5rap1Q8BTW8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap1Q8BTW8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap1Q8BTW8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Cdk5rap1Q8BTW8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap1Q8BTW8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.27■□□□□ 0.36
Cdk5rap1Q8BTW8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap1Q8BTW8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.27■□□□□ 0.36
Cdk5rap1Q8BTW8 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.27■□□□□ 0.36
Cdk5rap1Q8BTW8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.27■□□□□ 0.36
Cdk5rap1Q8BTW8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Cdk5rap1Q8BTW8 Gm10252-201ENSMUST00000209541 832 ntBASIC17.27■□□□□ 0.36
Cdk5rap1Q8BTW8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap1Q8BTW8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap1Q8BTW8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdk5rap1Q8BTW8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdk5rap1Q8BTW8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cdk5rap1Q8BTW8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdk5rap1Q8BTW8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdk5rap1Q8BTW8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap1Q8BTW8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.26■□□□□ 0.35
Cdk5rap1Q8BTW8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap1Q8BTW8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap1Q8BTW8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap1Q8BTW8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap1Q8BTW8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap1Q8BTW8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap1Q8BTW8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.26■□□□□ 0.35
Cdk5rap1Q8BTW8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cdk5rap1Q8BTW8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap1Q8BTW8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap1Q8BTW8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdk5rap1Q8BTW8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap1Q8BTW8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap1Q8BTW8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap1Q8BTW8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap1Q8BTW8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.25■□□□□ 0.35
Cdk5rap1Q8BTW8 Gm10698-201ENSMUST00000182663 604 ntBASIC17.25■□□□□ 0.35
Cdk5rap1Q8BTW8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cdk5rap1Q8BTW8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cdk5rap1Q8BTW8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap1Q8BTW8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap1Q8BTW8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap1Q8BTW8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap1Q8BTW8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap1Q8BTW8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdk5rap1Q8BTW8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdk5rap1Q8BTW8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 Gm38285-201ENSMUST00000192928 922 ntBASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap1Q8BTW8 BC021767-201ENSMUST00000126387 1716 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms