Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rd3Q8BRE0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Rd3Q8BRE0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rd3Q8BRE0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rd3Q8BRE0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.39■□□□□ 0.69
Rd3Q8BRE0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rd3Q8BRE0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rd3Q8BRE0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rd3Q8BRE0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.39■□□□□ 0.69
Rd3Q8BRE0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rd3Q8BRE0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rd3Q8BRE0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rd3Q8BRE0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rd3Q8BRE0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rd3Q8BRE0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.38■□□□□ 0.69
Rd3Q8BRE0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rd3Q8BRE0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rd3Q8BRE0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rd3Q8BRE0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rd3Q8BRE0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.38■□□□□ 0.69
Rd3Q8BRE0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rd3Q8BRE0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rd3Q8BRE0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rd3Q8BRE0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rd3Q8BRE0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rd3Q8BRE0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rd3Q8BRE0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Rd3Q8BRE0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rd3Q8BRE0 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.37■□□□□ 0.69
Rd3Q8BRE0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.37■□□□□ 0.69
Rd3Q8BRE0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rd3Q8BRE0 Zfp783-201ENSMUST00000095946 670 ntBASIC19.37■□□□□ 0.69
Rd3Q8BRE0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.37■□□□□ 0.69
Rd3Q8BRE0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rd3Q8BRE0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rd3Q8BRE0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rd3Q8BRE0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rd3Q8BRE0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rd3Q8BRE0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rd3Q8BRE0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rd3Q8BRE0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.36■□□□□ 0.69
Rd3Q8BRE0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.36■□□□□ 0.69
Rd3Q8BRE0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.36■□□□□ 0.69
Rd3Q8BRE0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Rd3Q8BRE0 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.36■□□□□ 0.69
Rd3Q8BRE0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.36■□□□□ 0.69
Rd3Q8BRE0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rd3Q8BRE0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rd3Q8BRE0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rd3Q8BRE0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rd3Q8BRE0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rd3Q8BRE0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rd3Q8BRE0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rd3Q8BRE0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rd3Q8BRE0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rd3Q8BRE0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rd3Q8BRE0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rd3Q8BRE0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rd3Q8BRE0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rd3Q8BRE0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rd3Q8BRE0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rd3Q8BRE0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Rd3Q8BRE0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rd3Q8BRE0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.35■□□□□ 0.69
Rd3Q8BRE0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rd3Q8BRE0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rd3Q8BRE0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rd3Q8BRE0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rd3Q8BRE0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rd3Q8BRE0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rd3Q8BRE0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.34■□□□□ 0.69
Rd3Q8BRE0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rd3Q8BRE0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.34■□□□□ 0.69
Rd3Q8BRE0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.34■□□□□ 0.69
Rd3Q8BRE0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.34■□□□□ 0.69
Rd3Q8BRE0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rd3Q8BRE0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rd3Q8BRE0 Gm5417-201ENSMUST00000079706 384 ntBASIC19.34■□□□□ 0.69
Rd3Q8BRE0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rd3Q8BRE0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Rd3Q8BRE0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rd3Q8BRE0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rd3Q8BRE0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rd3Q8BRE0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rd3Q8BRE0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rd3Q8BRE0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rd3Q8BRE0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rd3Q8BRE0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rd3Q8BRE0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rd3Q8BRE0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rd3Q8BRE0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rd3Q8BRE0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Rd3Q8BRE0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rd3Q8BRE0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.33■□□□□ 0.68
Rd3Q8BRE0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rd3Q8BRE0 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.33■□□□□ 0.68
Rd3Q8BRE0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rd3Q8BRE0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rd3Q8BRE0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rd3Q8BRE0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms