Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smco3Q8BQM7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smco3Q8BQM7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.09■□□□□ 0.01
Smco3Q8BQM7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smco3Q8BQM7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Smco3Q8BQM7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smco3Q8BQM7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smco3Q8BQM7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smco3Q8BQM7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smco3Q8BQM7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Smco3Q8BQM7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smco3Q8BQM7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smco3Q8BQM7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Smco3Q8BQM7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smco3Q8BQM7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smco3Q8BQM7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.08■□□□□ 0
Smco3Q8BQM7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Smco3Q8BQM7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Smco3Q8BQM7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smco3Q8BQM7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Smco3Q8BQM7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smco3Q8BQM7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Smco3Q8BQM7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smco3Q8BQM7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smco3Q8BQM7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smco3Q8BQM7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Smco3Q8BQM7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Smco3Q8BQM7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Smco3Q8BQM7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Smco3Q8BQM7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smco3Q8BQM7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Smco3Q8BQM7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smco3Q8BQM7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.07■□□□□ 0
Smco3Q8BQM7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smco3Q8BQM7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smco3Q8BQM7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Smco3Q8BQM7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Smco3Q8BQM7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Smco3Q8BQM7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Smco3Q8BQM7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smco3Q8BQM7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smco3Q8BQM7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smco3Q8BQM7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smco3Q8BQM7 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smco3Q8BQM7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smco3Q8BQM7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.06■□□□□ 0
Smco3Q8BQM7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smco3Q8BQM7 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.06■□□□□ 0
Smco3Q8BQM7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Smco3Q8BQM7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Smco3Q8BQM7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smco3Q8BQM7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.06■□□□□ 0
Smco3Q8BQM7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smco3Q8BQM7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smco3Q8BQM7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smco3Q8BQM7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smco3Q8BQM7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
Smco3Q8BQM7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smco3Q8BQM7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smco3Q8BQM7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smco3Q8BQM7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Smco3Q8BQM7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ -0
Smco3Q8BQM7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smco3Q8BQM7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Smco3Q8BQM7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smco3Q8BQM7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.05■□□□□ -0
Smco3Q8BQM7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Smco3Q8BQM7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Smco3Q8BQM7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.04■□□□□ -0
Smco3Q8BQM7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.04■□□□□ -0
Smco3Q8BQM7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.04■□□□□ -0
Smco3Q8BQM7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Smco3Q8BQM7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Smco3Q8BQM7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smco3Q8BQM7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smco3Q8BQM7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smco3Q8BQM7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smco3Q8BQM7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Smco3Q8BQM7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smco3Q8BQM7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.03■□□□□ -0
Smco3Q8BQM7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smco3Q8BQM7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smco3Q8BQM7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms