Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf18Q8BM39 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf18Q8BM39 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf18Q8BM39 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf18Q8BM39 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.35■□□□□ 0.37
Prpf18Q8BM39 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf18Q8BM39 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Prpf18Q8BM39 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf18Q8BM39 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf18Q8BM39 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf18Q8BM39 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf18Q8BM39 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf18Q8BM39 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf18Q8BM39 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prpf18Q8BM39 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Mir7075-201ENSMUST00000184187 82 ntBASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Fst-202ENSMUST00000223640 2612 ntBASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Prpf18Q8BM39 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf18Q8BM39 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
Prpf18Q8BM39 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Prpf18Q8BM39 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf18Q8BM39 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf18Q8BM39 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf18Q8BM39 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Prpf18Q8BM39 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf18Q8BM39 Gm45417-201ENSMUST00000209533 758 ntBASIC17.33■□□□□ 0.36
Prpf18Q8BM39 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.33■□□□□ 0.36
Prpf18Q8BM39 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf18Q8BM39 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf18Q8BM39 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf18Q8BM39 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf18Q8BM39 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf18Q8BM39 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Prpf18Q8BM39 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Prpf18Q8BM39 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Prpf18Q8BM39 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf18Q8BM39 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf18Q8BM39 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf18Q8BM39 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf18Q8BM39 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf18Q8BM39 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf18Q8BM39 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf18Q8BM39 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf18Q8BM39 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf18Q8BM39 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf18Q8BM39 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms