Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cdhr3Q8BL00 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Cdhr3Q8BL00 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Cdhr3Q8BL00 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdhr3Q8BL00 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdhr3Q8BL00 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Cdhr3Q8BL00 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cdhr3Q8BL00 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdhr3Q8BL00 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdhr3Q8BL00 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdhr3Q8BL00 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cdhr3Q8BL00 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdhr3Q8BL00 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdhr3Q8BL00 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdhr3Q8BL00 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdhr3Q8BL00 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cdhr3Q8BL00 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdhr3Q8BL00 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.93■□□□□ 0.14
Cdhr3Q8BL00 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.93■□□□□ 0.14
Cdhr3Q8BL00 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdhr3Q8BL00 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdhr3Q8BL00 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cdhr3Q8BL00 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.93■□□□□ 0.14
Cdhr3Q8BL00 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.93■□□□□ 0.14
Cdhr3Q8BL00 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdhr3Q8BL00 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdhr3Q8BL00 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdhr3Q8BL00 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.93■□□□□ 0.14
Cdhr3Q8BL00 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdhr3Q8BL00 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Cdhr3Q8BL00 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Cdhr3Q8BL00 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr3Q8BL00 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Cdhr3Q8BL00 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr3Q8BL00 Gm43060-201ENSMUST00000200621 289 ntBASIC15.92■□□□□ 0.14
Cdhr3Q8BL00 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr3Q8BL00 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.92■□□□□ 0.14
Cdhr3Q8BL00 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.92■□□□□ 0.14
Cdhr3Q8BL00 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr3Q8BL00 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr3Q8BL00 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr3Q8BL00 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdhr3Q8BL00 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cdhr3Q8BL00 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr3Q8BL00 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Cdhr3Q8BL00 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr3Q8BL00 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr3Q8BL00 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cdhr3Q8BL00 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr3Q8BL00 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr3Q8BL00 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cdhr3Q8BL00 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr3Q8BL00 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdhr3Q8BL00 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr3Q8BL00 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr3Q8BL00 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.9■□□□□ 0.14
Cdhr3Q8BL00 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdhr3Q8BL00 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms