Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nop53Q8BK35 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nop53Q8BK35 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.56■□□□□ 0.72
Nop53Q8BK35 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.56■□□□□ 0.72
Nop53Q8BK35 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nop53Q8BK35 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nop53Q8BK35 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.56■□□□□ 0.72
Nop53Q8BK35 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nop53Q8BK35 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.56■□□□□ 0.72
Nop53Q8BK35 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.56■□□□□ 0.72
Nop53Q8BK35 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nop53Q8BK35 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nop53Q8BK35 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nop53Q8BK35 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nop53Q8BK35 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nop53Q8BK35 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nop53Q8BK35 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nop53Q8BK35 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Nop53Q8BK35 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.55■□□□□ 0.72
Nop53Q8BK35 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nop53Q8BK35 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nop53Q8BK35 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nop53Q8BK35 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.55■□□□□ 0.72
Nop53Q8BK35 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.55■□□□□ 0.72
Nop53Q8BK35 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.55■□□□□ 0.72
Nop53Q8BK35 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nop53Q8BK35 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nop53Q8BK35 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nop53Q8BK35 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nop53Q8BK35 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nop53Q8BK35 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nop53Q8BK35 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nop53Q8BK35 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Nop53Q8BK35 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nop53Q8BK35 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nop53Q8BK35 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nop53Q8BK35 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nop53Q8BK35 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nop53Q8BK35 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nop53Q8BK35 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Nop53Q8BK35 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.54■□□□□ 0.72
Nop53Q8BK35 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nop53Q8BK35 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nop53Q8BK35 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nop53Q8BK35 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nop53Q8BK35 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nop53Q8BK35 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nop53Q8BK35 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nop53Q8BK35 Gm10849-201ENSMUST00000100397 618 ntBASIC19.53■□□□□ 0.72
Nop53Q8BK35 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nop53Q8BK35 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nop53Q8BK35 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nop53Q8BK35 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.53■□□□□ 0.72
Nop53Q8BK35 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nop53Q8BK35 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nop53Q8BK35 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nop53Q8BK35 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nop53Q8BK35 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nop53Q8BK35 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Nop53Q8BK35 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.52■□□□□ 0.72
Nop53Q8BK35 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nop53Q8BK35 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nop53Q8BK35 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nop53Q8BK35 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nop53Q8BK35 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.52■□□□□ 0.72
Nop53Q8BK35 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.52■□□□□ 0.72
Nop53Q8BK35 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.52■□□□□ 0.72
Nop53Q8BK35 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nop53Q8BK35 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.52■□□□□ 0.72
Nop53Q8BK35 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nop53Q8BK35 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Nop53Q8BK35 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Nop53Q8BK35 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nop53Q8BK35 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nop53Q8BK35 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nop53Q8BK35 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nop53Q8BK35 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nop53Q8BK35 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Nop53Q8BK35 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.52■□□□□ 0.71
Nop53Q8BK35 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nop53Q8BK35 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Nop53Q8BK35 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nop53Q8BK35 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nop53Q8BK35 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.51■□□□□ 0.71
Nop53Q8BK35 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nop53Q8BK35 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nop53Q8BK35 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nop53Q8BK35 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.51■□□□□ 0.71
Nop53Q8BK35 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nop53Q8BK35 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nop53Q8BK35 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.51■□□□□ 0.71
Nop53Q8BK35 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nop53Q8BK35 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nop53Q8BK35 Rarb-207ENSMUST00000225921 2756 ntBASIC19.51■□□□□ 0.71
Nop53Q8BK35 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nop53Q8BK35 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nop53Q8BK35 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nop53Q8BK35 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.51■□□□□ 0.71
Nop53Q8BK35 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Nop53Q8BK35 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms