Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Gm42545-201ENSMUST00000202755 922 ntBASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Smarcal1Q8BJL0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Smarcal1Q8BJL0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Smarcal1Q8BJL0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.45■□□□□ 0.7
Smarcal1Q8BJL0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcal1Q8BJL0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcal1Q8BJL0 Gm37292-201ENSMUST00000192062 758 ntBASIC19.45■□□□□ 0.7
Smarcal1Q8BJL0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.45■□□□□ 0.7
Smarcal1Q8BJL0 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.45■□□□□ 0.7
Smarcal1Q8BJL0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcal1Q8BJL0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcal1Q8BJL0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcal1Q8BJL0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Smarcal1Q8BJL0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcal1Q8BJL0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Smarcal1Q8BJL0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smarcal1Q8BJL0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Gm10231-201ENSMUST00000181584 441 ntBASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Gm10175-202ENSMUST00000208752 441 ntBASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Timm23-208ENSMUST00000226683 750 ntBASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Smarcal1Q8BJL0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcal1Q8BJL0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcal1Q8BJL0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcal1Q8BJL0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcal1Q8BJL0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcal1Q8BJL0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Smarcal1Q8BJL0 Gm30025-201ENSMUST00000218555 728 ntBASIC19.42■□□□□ 0.7
Smarcal1Q8BJL0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcal1Q8BJL0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcal1Q8BJL0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcal1Q8BJL0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Smarcal1Q8BJL0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Smarcal1Q8BJL0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.42■□□□□ 0.7
Smarcal1Q8BJL0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcal1Q8BJL0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.41■□□□□ 0.7
Smarcal1Q8BJL0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcal1Q8BJL0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.41■□□□□ 0.7
Smarcal1Q8BJL0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcal1Q8BJL0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcal1Q8BJL0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcal1Q8BJL0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcal1Q8BJL0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcal1Q8BJL0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcal1Q8BJL0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcal1Q8BJL0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcal1Q8BJL0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcal1Q8BJL0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcal1Q8BJL0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcal1Q8BJL0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcal1Q8BJL0 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.4■□□□□ 0.7
Smarcal1Q8BJL0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcal1Q8BJL0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcal1Q8BJL0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.4■□□□□ 0.7
Smarcal1Q8BJL0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcal1Q8BJL0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcal1Q8BJL0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Smarcal1Q8BJL0 Gm12382-201ENSMUST00000122005 922 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms