Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nod1Q8BHB0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nod1Q8BHB0 Gm9987-201ENSMUST00000069768 567 ntBASIC19.23■□□□□ 0.67
Nod1Q8BHB0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Nod1Q8BHB0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nod1Q8BHB0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nod1Q8BHB0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nod1Q8BHB0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nod1Q8BHB0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nod1Q8BHB0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nod1Q8BHB0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nod1Q8BHB0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nod1Q8BHB0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nod1Q8BHB0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Nod1Q8BHB0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nod1Q8BHB0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.22■□□□□ 0.67
Nod1Q8BHB0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nod1Q8BHB0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.22■□□□□ 0.67
Nod1Q8BHB0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nod1Q8BHB0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nod1Q8BHB0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nod1Q8BHB0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nod1Q8BHB0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nod1Q8BHB0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nod1Q8BHB0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nod1Q8BHB0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nod1Q8BHB0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nod1Q8BHB0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nod1Q8BHB0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Nod1Q8BHB0 Gm11643-201ENSMUST00000119578 864 ntBASIC19.21■□□□□ 0.67
Nod1Q8BHB0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nod1Q8BHB0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nod1Q8BHB0 Gm10138-203ENSMUST00000206952 366 ntBASIC19.21■□□□□ 0.67
Nod1Q8BHB0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nod1Q8BHB0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nod1Q8BHB0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Nod1Q8BHB0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nod1Q8BHB0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nod1Q8BHB0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nod1Q8BHB0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nod1Q8BHB0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.2■□□□□ 0.66
Nod1Q8BHB0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nod1Q8BHB0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.2■□□□□ 0.66
Nod1Q8BHB0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.2■□□□□ 0.66
Nod1Q8BHB0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nod1Q8BHB0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nod1Q8BHB0 Golph3-202ENSMUST00000226517 2359 ntBASIC19.2■□□□□ 0.66
Nod1Q8BHB0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nod1Q8BHB0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nod1Q8BHB0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nod1Q8BHB0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nod1Q8BHB0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Nod1Q8BHB0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nod1Q8BHB0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nod1Q8BHB0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nod1Q8BHB0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.19■□□□□ 0.66
Nod1Q8BHB0 Gm43183-201ENSMUST00000200632 547 ntBASIC19.19■□□□□ 0.66
Nod1Q8BHB0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.19■□□□□ 0.66
Nod1Q8BHB0 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.19■□□□□ 0.66
Nod1Q8BHB0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nod1Q8BHB0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nod1Q8BHB0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nod1Q8BHB0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nod1Q8BHB0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.19■□□□□ 0.66
Nod1Q8BHB0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nod1Q8BHB0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Nod1Q8BHB0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Nod1Q8BHB0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Nod1Q8BHB0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nod1Q8BHB0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nod1Q8BHB0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Nod1Q8BHB0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.18■□□□□ 0.66
Nod1Q8BHB0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nod1Q8BHB0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.18■□□□□ 0.66
Nod1Q8BHB0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nod1Q8BHB0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nod1Q8BHB0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.18■□□□□ 0.66
Nod1Q8BHB0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nod1Q8BHB0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nod1Q8BHB0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nod1Q8BHB0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nod1Q8BHB0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nod1Q8BHB0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms