Protein–RNA interactions for Protein: Q8BGU0

Cyp4f39, Cytochrome P450, family 4, subfamily f, polypeptide 39, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cyp4f39Q8BGU0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cyp4f39Q8BGU0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cyp4f39Q8BGU0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cyp4f39Q8BGU0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cyp4f39Q8BGU0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cyp4f39Q8BGU0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cyp4f39Q8BGU0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cyp4f39Q8BGU0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.65■□□□□ 0.9
Cyp4f39Q8BGU0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cyp4f39Q8BGU0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cyp4f39Q8BGU0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cyp4f39Q8BGU0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cyp4f39Q8BGU0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cyp4f39Q8BGU0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.64■□□□□ 0.89
Cyp4f39Q8BGU0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.64■□□□□ 0.89
Cyp4f39Q8BGU0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cyp4f39Q8BGU0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cyp4f39Q8BGU0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cyp4f39Q8BGU0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cyp4f39Q8BGU0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cyp4f39Q8BGU0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cyp4f39Q8BGU0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cyp4f39Q8BGU0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cyp4f39Q8BGU0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Gm27275-201ENSMUST00000184318 272 ntBASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cyp4f39Q8BGU0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cyp4f39Q8BGU0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cyp4f39Q8BGU0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cyp4f39Q8BGU0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cyp4f39Q8BGU0 Gm10812-201ENSMUST00000099864 546 ntBASIC20.62■□□□□ 0.89
Cyp4f39Q8BGU0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cyp4f39Q8BGU0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cyp4f39Q8BGU0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cyp4f39Q8BGU0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cyp4f39Q8BGU0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.62■□□□□ 0.89
Cyp4f39Q8BGU0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cyp4f39Q8BGU0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cyp4f39Q8BGU0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Cyp4f39Q8BGU0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cyp4f39Q8BGU0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.61■□□□□ 0.89
Cyp4f39Q8BGU0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cyp4f39Q8BGU0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cyp4f39Q8BGU0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cyp4f39Q8BGU0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cyp4f39Q8BGU0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cyp4f39Q8BGU0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.6■□□□□ 0.89
Cyp4f39Q8BGU0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cyp4f39Q8BGU0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cyp4f39Q8BGU0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cyp4f39Q8BGU0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cyp4f39Q8BGU0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cyp4f39Q8BGU0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Cyp4f39Q8BGU0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cyp4f39Q8BGU0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cyp4f39Q8BGU0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cyp4f39Q8BGU0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cyp4f39Q8BGU0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cyp4f39Q8BGU0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.59■□□□□ 0.89
Cyp4f39Q8BGU0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.59■□□□□ 0.89
Cyp4f39Q8BGU0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cyp4f39Q8BGU0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cyp4f39Q8BGU0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cyp4f39Q8BGU0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cyp4f39Q8BGU0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cyp4f39Q8BGU0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cyp4f39Q8BGU0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cyp4f39Q8BGU0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.59■□□□□ 0.89
Cyp4f39Q8BGU0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cyp4f39Q8BGU0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cyp4f39Q8BGU0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cyp4f39Q8BGU0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cyp4f39Q8BGU0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cyp4f39Q8BGU0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
Cyp4f39Q8BGU0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Cyp4f39Q8BGU0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cyp4f39Q8BGU0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cyp4f39Q8BGU0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cyp4f39Q8BGU0 Gm12896-201ENSMUST00000118430 226 ntBASIC20.58■□□□□ 0.89
Cyp4f39Q8BGU0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.58■□□□□ 0.89
Cyp4f39Q8BGU0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.58■□□□□ 0.89
Cyp4f39Q8BGU0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cyp4f39Q8BGU0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.58■□□□□ 0.89
Cyp4f39Q8BGU0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms