Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Srrm3Q80WV7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Srrm3Q80WV7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.01■□□□□ 0.63
Srrm3Q80WV7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Srrm3Q80WV7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.01■□□□□ 0.63
Srrm3Q80WV7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.01■□□□□ 0.63
Srrm3Q80WV7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Srrm3Q80WV7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Srrm3Q80WV7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Srrm3Q80WV7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Srrm3Q80WV7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Srrm3Q80WV7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Srrm3Q80WV7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Srrm3Q80WV7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Srrm3Q80WV7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19■□□□□ 0.63
Srrm3Q80WV7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19■□□□□ 0.63
Srrm3Q80WV7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Srrm3Q80WV7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Srrm3Q80WV7 Gm43672-201ENSMUST00000199072 1731 ntBASIC19■□□□□ 0.63
Srrm3Q80WV7 Gm10129-202ENSMUST00000193100 1316 ntBASIC19■□□□□ 0.63
Srrm3Q80WV7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Srrm3Q80WV7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Srrm3Q80WV7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Srrm3Q80WV7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Srrm3Q80WV7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.99■□□□□ 0.63
Srrm3Q80WV7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.99■□□□□ 0.63
Srrm3Q80WV7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Srrm3Q80WV7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Srrm3Q80WV7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Srrm3Q80WV7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Srrm3Q80WV7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Srrm3Q80WV7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Srrm3Q80WV7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Srrm3Q80WV7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Srrm3Q80WV7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Srrm3Q80WV7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Srrm3Q80WV7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.98■□□□□ 0.63
Srrm3Q80WV7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.98■□□□□ 0.63
Srrm3Q80WV7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.98■□□□□ 0.63
Srrm3Q80WV7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Srrm3Q80WV7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Srrm3Q80WV7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Srrm3Q80WV7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Srrm3Q80WV7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm3Q80WV7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm3Q80WV7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm3Q80WV7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm3Q80WV7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm3Q80WV7 Gm12251-201ENSMUST00000117893 792 ntBASIC18.97■□□□□ 0.63
Srrm3Q80WV7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Srrm3Q80WV7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm3Q80WV7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm3Q80WV7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Srrm3Q80WV7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Srrm3Q80WV7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Srrm3Q80WV7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Nespas-201ENSMUST00000143738 1083 ntBASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Srrm3Q80WV7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Srrm3Q80WV7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Srrm3Q80WV7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Srrm3Q80WV7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Srrm3Q80WV7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Srrm3Q80WV7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Srrm3Q80WV7 AV356131-201ENSMUST00000206201 750 ntBASIC18.95■□□□□ 0.62
Srrm3Q80WV7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Srrm3Q80WV7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Srrm3Q80WV7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Srrm3Q80WV7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
Srrm3Q80WV7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms