Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trim36Q80WG7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim36Q80WG7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim36Q80WG7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim36Q80WG7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim36Q80WG7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.62■□□□□ 0.41
Trim36Q80WG7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim36Q80WG7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim36Q80WG7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim36Q80WG7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim36Q80WG7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim36Q80WG7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim36Q80WG7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim36Q80WG7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim36Q80WG7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim36Q80WG7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim36Q80WG7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.6■□□□□ 0.41
Trim36Q80WG7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
Trim36Q80WG7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim36Q80WG7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim36Q80WG7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim36Q80WG7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim36Q80WG7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim36Q80WG7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.59■□□□□ 0.41
Trim36Q80WG7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Gm27801-201ENSMUST00000184174 223 ntBASIC17.59■□□□□ 0.41
Trim36Q80WG7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim36Q80WG7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim36Q80WG7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim36Q80WG7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.58■□□□□ 0.41
Trim36Q80WG7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim36Q80WG7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim36Q80WG7 Reep4-203ENSMUST00000226563 1444 ntBASIC17.58■□□□□ 0.41
Trim36Q80WG7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim36Q80WG7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim36Q80WG7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim36Q80WG7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim36Q80WG7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.58■□□□□ 0.4
Trim36Q80WG7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trim36Q80WG7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim36Q80WG7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim36Q80WG7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim36Q80WG7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim36Q80WG7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim36Q80WG7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim36Q80WG7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim36Q80WG7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.57■□□□□ 0.4
Trim36Q80WG7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim36Q80WG7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim36Q80WG7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim36Q80WG7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim36Q80WG7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms