Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.31■□□□□ 0.52
Usp8Q80U87 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp8Q80U87 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp8Q80U87 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp8Q80U87 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Usp8Q80U87 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.31■□□□□ 0.52
Usp8Q80U87 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp8Q80U87 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp8Q80U87 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.31■□□□□ 0.52
Usp8Q80U87 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Usp8Q80U87 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp8Q80U87 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp8Q80U87 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp8Q80U87 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp8Q80U87 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp8Q80U87 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp8Q80U87 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Usp8Q80U87 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp8Q80U87 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp8Q80U87 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp8Q80U87 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp8Q80U87 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Usp8Q80U87 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.3■□□□□ 0.52
Usp8Q80U87 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.3■□□□□ 0.52
Usp8Q80U87 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp8Q80U87 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp8Q80U87 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Usp8Q80U87 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Usp8Q80U87 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Usp8Q80U87 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp8Q80U87 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Usp8Q80U87 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp8Q80U87 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp8Q80U87 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp8Q80U87 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp8Q80U87 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp8Q80U87 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp8Q80U87 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Usp8Q80U87 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.29■□□□□ 0.52
Usp8Q80U87 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Usp8Q80U87 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp8Q80U87 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp8Q80U87 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp8Q80U87 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Usp8Q80U87 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Usp8Q80U87 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp8Q80U87 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp8Q80U87 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.28■□□□□ 0.52
Usp8Q80U87 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp8Q80U87 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp8Q80U87 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp8Q80U87 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp8Q80U87 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Usp8Q80U87 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp8Q80U87 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Usp8Q80U87 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp8Q80U87 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp8Q80U87 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp8Q80U87 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Usp8Q80U87 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp8Q80U87 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Usp8Q80U87 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Usp8Q80U87 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.27■□□□□ 0.52
Usp8Q80U87 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp8Q80U87 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.27■□□□□ 0.52
Usp8Q80U87 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp8Q80U87 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Usp8Q80U87 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.27■□□□□ 0.52
Usp8Q80U87 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
Usp8Q80U87 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Usp8Q80U87 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp8Q80U87 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Usp8Q80U87 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp8Q80U87 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp8Q80U87 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Usp8Q80U87 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Usp8Q80U87 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Usp8Q80U87 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Usp8Q80U87 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp8Q80U87 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Usp8Q80U87 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Usp8Q80U87 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.26■□□□□ 0.51
Usp8Q80U87 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.26■□□□□ 0.51
Usp8Q80U87 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp8Q80U87 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp8Q80U87 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp8Q80U87 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Usp8Q80U87 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.26■□□□□ 0.51
Usp8Q80U87 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Usp8Q80U87 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp8Q80U87 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp8Q80U87 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp8Q80U87 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp8Q80U87 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.25■□□□□ 0.51
Usp8Q80U87 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp8Q80U87 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp8Q80U87 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp8Q80U87 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Usp8Q80U87 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Usp8Q80U87 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms