Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sh3d21Q7TSG5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.02■□□□□ 0.79
Sh3d21Q7TSG5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3d21Q7TSG5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Sh3d21Q7TSG5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.01■□□□□ 0.79
Sh3d21Q7TSG5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3d21Q7TSG5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3d21Q7TSG5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3d21Q7TSG5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3d21Q7TSG5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Sh3d21Q7TSG5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3d21Q7TSG5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Sh3d21Q7TSG5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3d21Q7TSG5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3d21Q7TSG5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3d21Q7TSG5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Sh3d21Q7TSG5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sh3d21Q7TSG5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3d21Q7TSG5 Gm6365-201ENSMUST00000054711 744 ntBASIC20■□□□□ 0.79
Sh3d21Q7TSG5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3d21Q7TSG5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3d21Q7TSG5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sh3d21Q7TSG5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3d21Q7TSG5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3d21Q7TSG5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3d21Q7TSG5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh3d21Q7TSG5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh3d21Q7TSG5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.99■□□□□ 0.79
Sh3d21Q7TSG5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.99■□□□□ 0.79
Sh3d21Q7TSG5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh3d21Q7TSG5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh3d21Q7TSG5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh3d21Q7TSG5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
Sh3d21Q7TSG5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh3d21Q7TSG5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh3d21Q7TSG5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Sh3d21Q7TSG5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3d21Q7TSG5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3d21Q7TSG5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3d21Q7TSG5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3d21Q7TSG5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.98■□□□□ 0.79
Sh3d21Q7TSG5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.98■□□□□ 0.79
Sh3d21Q7TSG5 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.98■□□□□ 0.79
Sh3d21Q7TSG5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.98■□□□□ 0.79
Sh3d21Q7TSG5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3d21Q7TSG5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3d21Q7TSG5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3d21Q7TSG5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3d21Q7TSG5 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.96■□□□□ 0.79
Sh3d21Q7TSG5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3d21Q7TSG5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3d21Q7TSG5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3d21Q7TSG5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3d21Q7TSG5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.96■□□□□ 0.79
Sh3d21Q7TSG5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3d21Q7TSG5 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.96■□□□□ 0.79
Sh3d21Q7TSG5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3d21Q7TSG5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3d21Q7TSG5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3d21Q7TSG5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Sh3d21Q7TSG5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Sh3d21Q7TSG5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3d21Q7TSG5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3d21Q7TSG5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Sh3d21Q7TSG5 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3d21Q7TSG5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.95■□□□□ 0.78
Sh3d21Q7TSG5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3d21Q7TSG5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.95■□□□□ 0.78
Sh3d21Q7TSG5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Sh3d21Q7TSG5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3d21Q7TSG5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Sh3d21Q7TSG5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.94■□□□□ 0.78
Sh3d21Q7TSG5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3d21Q7TSG5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sh3d21Q7TSG5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.94■□□□□ 0.78
Sh3d21Q7TSG5 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.94■□□□□ 0.78
Sh3d21Q7TSG5 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.94■□□□□ 0.78
Sh3d21Q7TSG5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3d21Q7TSG5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Sh3d21Q7TSG5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3d21Q7TSG5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3d21Q7TSG5 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.93■□□□□ 0.78
Sh3d21Q7TSG5 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.93■□□□□ 0.78
Sh3d21Q7TSG5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms