Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ubfd1Q78JW9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.77■□□□□ 0.43
Ubfd1Q78JW9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ubfd1Q78JW9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ubfd1Q78JW9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ubfd1Q78JW9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubfd1Q78JW9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ubfd1Q78JW9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ubfd1Q78JW9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubfd1Q78JW9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubfd1Q78JW9 Gm6576-201ENSMUST00000169678 883 ntBASIC17.76■□□□□ 0.43
Ubfd1Q78JW9 Gm10138-203ENSMUST00000206952 366 ntBASIC17.76■□□□□ 0.43
Ubfd1Q78JW9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ubfd1Q78JW9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ubfd1Q78JW9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubfd1Q78JW9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubfd1Q78JW9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.76■□□□□ 0.43
Ubfd1Q78JW9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubfd1Q78JW9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubfd1Q78JW9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubfd1Q78JW9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubfd1Q78JW9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubfd1Q78JW9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.75■□□□□ 0.43
Ubfd1Q78JW9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubfd1Q78JW9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.75■□□□□ 0.43
Ubfd1Q78JW9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubfd1Q78JW9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubfd1Q78JW9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubfd1Q78JW9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubfd1Q78JW9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Mtag2-201ENSMUST00000058665 714 ntBASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ubfd1Q78JW9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubfd1Q78JW9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ubfd1Q78JW9 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.73■□□□□ 0.43
Ubfd1Q78JW9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubfd1Q78JW9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubfd1Q78JW9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubfd1Q78JW9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.73■□□□□ 0.43
Ubfd1Q78JW9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.73■□□□□ 0.43
Ubfd1Q78JW9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubfd1Q78JW9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubfd1Q78JW9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.73■□□□□ 0.43
Ubfd1Q78JW9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubfd1Q78JW9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubfd1Q78JW9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubfd1Q78JW9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ubfd1Q78JW9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubfd1Q78JW9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubfd1Q78JW9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubfd1Q78JW9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubfd1Q78JW9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ubfd1Q78JW9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ubfd1Q78JW9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubfd1Q78JW9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ubfd1Q78JW9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.71■□□□□ 0.43
Ubfd1Q78JW9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubfd1Q78JW9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ubfd1Q78JW9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.71■□□□□ 0.43
Ubfd1Q78JW9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ubfd1Q78JW9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms