Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.96■■□□□ 1.11
Npc1l1Q6T3U4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Npc1l1Q6T3U4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Npc1l1Q6T3U4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Npc1l1Q6T3U4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Npc1l1Q6T3U4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.96■■□□□ 1.11
Npc1l1Q6T3U4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Npc1l1Q6T3U4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Npc1l1Q6T3U4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.96■■□□□ 1.11
Npc1l1Q6T3U4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Npc1l1Q6T3U4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Npc1l1Q6T3U4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Npc1l1Q6T3U4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Npc1l1Q6T3U4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Npc1l1Q6T3U4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
Npc1l1Q6T3U4 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.95■■□□□ 1.1
Npc1l1Q6T3U4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.95■■□□□ 1.1
Npc1l1Q6T3U4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Npc1l1Q6T3U4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Npc1l1Q6T3U4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Npc1l1Q6T3U4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Npc1l1Q6T3U4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Npc1l1Q6T3U4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Npc1l1Q6T3U4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Npc1l1Q6T3U4 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.95■■□□□ 1.1
Npc1l1Q6T3U4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Npc1l1Q6T3U4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Npc1l1Q6T3U4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.94■■□□□ 1.1
Npc1l1Q6T3U4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Npc1l1Q6T3U4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Npc1l1Q6T3U4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.94■■□□□ 1.1
Npc1l1Q6T3U4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.94■■□□□ 1.1
Npc1l1Q6T3U4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.94■■□□□ 1.1
Npc1l1Q6T3U4 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.94■■□□□ 1.1
Npc1l1Q6T3U4 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.94■■□□□ 1.1
Npc1l1Q6T3U4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
Npc1l1Q6T3U4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Npc1l1Q6T3U4 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.94■■□□□ 1.1
Npc1l1Q6T3U4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Npc1l1Q6T3U4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.94■■□□□ 1.1
Npc1l1Q6T3U4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Npc1l1Q6T3U4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Npc1l1Q6T3U4 Flg-201ENSMUST00000050758 1488 ntBASIC21.93■■□□□ 1.1
Npc1l1Q6T3U4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Npc1l1Q6T3U4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Npc1l1Q6T3U4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Npc1l1Q6T3U4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.93■■□□□ 1.1
Npc1l1Q6T3U4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Npc1l1Q6T3U4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.93■■□□□ 1.1
Npc1l1Q6T3U4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Npc1l1Q6T3U4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.93■■□□□ 1.1
Npc1l1Q6T3U4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Npc1l1Q6T3U4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Npc1l1Q6T3U4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Npc1l1Q6T3U4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Npc1l1Q6T3U4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Npc1l1Q6T3U4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Npc1l1Q6T3U4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.92■■□□□ 1.1
Npc1l1Q6T3U4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Npc1l1Q6T3U4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Npc1l1Q6T3U4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Npc1l1Q6T3U4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Npc1l1Q6T3U4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Npc1l1Q6T3U4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.9■■□□□ 1.1
Npc1l1Q6T3U4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Npc1l1Q6T3U4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Npc1l1Q6T3U4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Npc1l1Q6T3U4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Npc1l1Q6T3U4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Npc1l1Q6T3U4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.9■■□□□ 1.1
Npc1l1Q6T3U4 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.9■■□□□ 1.1
Npc1l1Q6T3U4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Npc1l1Q6T3U4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Npc1l1Q6T3U4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Npc1l1Q6T3U4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Npc1l1Q6T3U4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Npc1l1Q6T3U4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Npc1l1Q6T3U4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Npc1l1Q6T3U4 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.89■■□□□ 1.1
Npc1l1Q6T3U4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Npc1l1Q6T3U4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Npc1l1Q6T3U4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Npc1l1Q6T3U4 Gm13158-201ENSMUST00000122007 736 ntBASIC21.89■■□□□ 1.1
Npc1l1Q6T3U4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.89■■□□□ 1.1
Npc1l1Q6T3U4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Npc1l1Q6T3U4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Npc1l1Q6T3U4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Npc1l1Q6T3U4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Npc1l1Q6T3U4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Npc1l1Q6T3U4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Npc1l1Q6T3U4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Npc1l1Q6T3U4 Gm15565-201ENSMUST00000118890 427 ntBASIC21.88■■□□□ 1.09
Npc1l1Q6T3U4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Npc1l1Q6T3U4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Npc1l1Q6T3U4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Npc1l1Q6T3U4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Npc1l1Q6T3U4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Npc1l1Q6T3U4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Npc1l1Q6T3U4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Npc1l1Q6T3U4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms