Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp40Q6PE01 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp40Q6PE01 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp40Q6PE01 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.11■□□□□ 0.17
Snrnp40Q6PE01 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp40Q6PE01 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.11■□□□□ 0.17
Snrnp40Q6PE01 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp40Q6PE01 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp40Q6PE01 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp40Q6PE01 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Snrnp40Q6PE01 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp40Q6PE01 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Gm18959-201ENSMUST00000208954 655 ntBASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp40Q6PE01 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp40Q6PE01 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Snrnp40Q6PE01 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Snrnp40Q6PE01 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp40Q6PE01 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp40Q6PE01 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp40Q6PE01 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.08■□□□□ 0.16
Snrnp40Q6PE01 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp40Q6PE01 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp40Q6PE01 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.08■□□□□ 0.16
Snrnp40Q6PE01 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.08■□□□□ 0.16
Snrnp40Q6PE01 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp40Q6PE01 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp40Q6PE01 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp40Q6PE01 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp40Q6PE01 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Snrnp40Q6PE01 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Snrnp40Q6PE01 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Snrnp40Q6PE01 Gm23634-201ENSMUST00000175071 91 ntBASIC16.07■□□□□ 0.16
Snrnp40Q6PE01 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Snrnp40Q6PE01 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.07■□□□□ 0.16
Snrnp40Q6PE01 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.07■□□□□ 0.16
Snrnp40Q6PE01 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Snrnp40Q6PE01 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Snrnp40Q6PE01 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Snrnp40Q6PE01 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Snrnp40Q6PE01 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Snrnp40Q6PE01 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Snrnp40Q6PE01 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Snrnp40Q6PE01 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Snrnp40Q6PE01 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.06■□□□□ 0.16
Snrnp40Q6PE01 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.06■□□□□ 0.16
Snrnp40Q6PE01 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Snrnp40Q6PE01 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.06■□□□□ 0.16
Snrnp40Q6PE01 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.06■□□□□ 0.16
Snrnp40Q6PE01 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Snrnp40Q6PE01 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Snrnp40Q6PE01 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Snrnp40Q6PE01 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Snrnp40Q6PE01 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.05■□□□□ 0.16
Snrnp40Q6PE01 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp40Q6PE01 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp40Q6PE01 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.05■□□□□ 0.16
Snrnp40Q6PE01 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp40Q6PE01 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp40Q6PE01 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp40Q6PE01 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp40Q6PE01 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Snrnp40Q6PE01 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp40Q6PE01 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.05■□□□□ 0.16
Snrnp40Q6PE01 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms