Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShbQ6PD21 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
ShbQ6PD21 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShbQ6PD21 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ShbQ6PD21 Gm18669-201ENSMUST00000216049 778 ntBASIC19.91■□□□□ 0.78
ShbQ6PD21 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShbQ6PD21 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShbQ6PD21 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShbQ6PD21 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShbQ6PD21 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ShbQ6PD21 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShbQ6PD21 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ShbQ6PD21 Gm29518-201ENSMUST00000190858 372 ntBASIC19.9■□□□□ 0.78
ShbQ6PD21 Gm21559-201ENSMUST00000220638 855 ntBASIC19.9■□□□□ 0.78
ShbQ6PD21 Gm8587-201ENSMUST00000076538 843 ntBASIC19.9■□□□□ 0.78
ShbQ6PD21 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ShbQ6PD21 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ShbQ6PD21 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ShbQ6PD21 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.89■□□□□ 0.77
ShbQ6PD21 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ShbQ6PD21 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ShbQ6PD21 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ShbQ6PD21 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ShbQ6PD21 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ShbQ6PD21 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShbQ6PD21 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShbQ6PD21 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ShbQ6PD21 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShbQ6PD21 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShbQ6PD21 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ShbQ6PD21 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.88■□□□□ 0.77
ShbQ6PD21 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShbQ6PD21 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
ShbQ6PD21 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShbQ6PD21 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
ShbQ6PD21 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShbQ6PD21 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ShbQ6PD21 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.88■□□□□ 0.77
ShbQ6PD21 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ShbQ6PD21 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ShbQ6PD21 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ShbQ6PD21 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ShbQ6PD21 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.87■□□□□ 0.77
ShbQ6PD21 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.87■□□□□ 0.77
ShbQ6PD21 Gm25925-201ENSMUST00000158314 306 ntBASIC19.87■□□□□ 0.77
ShbQ6PD21 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.87■□□□□ 0.77
ShbQ6PD21 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.87■□□□□ 0.77
ShbQ6PD21 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.87■□□□□ 0.77
ShbQ6PD21 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.87■□□□□ 0.77
ShbQ6PD21 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ShbQ6PD21 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ShbQ6PD21 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ShbQ6PD21 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ShbQ6PD21 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ShbQ6PD21 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ShbQ6PD21 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.86■□□□□ 0.77
ShbQ6PD21 Gm9013-201ENSMUST00000132939 882 ntBASIC19.86■□□□□ 0.77
ShbQ6PD21 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ShbQ6PD21 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ShbQ6PD21 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ShbQ6PD21 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ShbQ6PD21 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ShbQ6PD21 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ShbQ6PD21 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.86■□□□□ 0.77
ShbQ6PD21 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ShbQ6PD21 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ShbQ6PD21 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ShbQ6PD21 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.85■□□□□ 0.77
ShbQ6PD21 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ShbQ6PD21 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.85■□□□□ 0.77
ShbQ6PD21 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.85■□□□□ 0.77
ShbQ6PD21 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.85■□□□□ 0.77
ShbQ6PD21 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ShbQ6PD21 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
ShbQ6PD21 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ShbQ6PD21 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ShbQ6PD21 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.84■□□□□ 0.77
ShbQ6PD21 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
ShbQ6PD21 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ShbQ6PD21 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.84■□□□□ 0.77
ShbQ6PD21 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ShbQ6PD21 Gm13474-201ENSMUST00000122466 815 ntBASIC19.84■□□□□ 0.77
ShbQ6PD21 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ShbQ6PD21 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ShbQ6PD21 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ShbQ6PD21 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ShbQ6PD21 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ShbQ6PD21 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ShbQ6PD21 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ShbQ6PD21 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ShbQ6PD21 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ShbQ6PD21 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ShbQ6PD21 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ShbQ6PD21 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.83■□□□□ 0.77
ShbQ6PD21 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ShbQ6PD21 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ShbQ6PD21 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.83■□□□□ 0.77
ShbQ6PD21 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ShbQ6PD21 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ShbQ6PD21 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms