Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcd3Q6P9Z1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcd3Q6P9Z1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcd3Q6P9Z1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcd3Q6P9Z1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Gm15039-201ENSMUST00000118914 875 ntBASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Gm38205-201ENSMUST00000192243 258 ntBASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Gm43017-201ENSMUST00000198296 752 ntBASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcd3Q6P9Z1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcd3Q6P9Z1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd3Q6P9Z1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.74■□□□□ 0.27
Smarcd3Q6P9Z1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smarcd3Q6P9Z1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd3Q6P9Z1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd3Q6P9Z1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd3Q6P9Z1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd3Q6P9Z1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd3Q6P9Z1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd3Q6P9Z1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd3Q6P9Z1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Smarcd3Q6P9Z1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd3Q6P9Z1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd3Q6P9Z1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd3Q6P9Z1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Smarcd3Q6P9Z1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcd3Q6P9Z1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd3Q6P9Z1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd3Q6P9Z1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd3Q6P9Z1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Smarcd3Q6P9Z1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd3Q6P9Z1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd3Q6P9Z1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd3Q6P9Z1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.73■□□□□ 0.27
Smarcd3Q6P9Z1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd3Q6P9Z1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Smarcd3Q6P9Z1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd3Q6P9Z1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd3Q6P9Z1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd3Q6P9Z1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcd3Q6P9Z1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Smarcd3Q6P9Z1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd3Q6P9Z1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd3Q6P9Z1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd3Q6P9Z1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd3Q6P9Z1 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.72■□□□□ 0.27
Smarcd3Q6P9Z1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd3Q6P9Z1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd3Q6P9Z1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd3Q6P9Z1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.72■□□□□ 0.27
Smarcd3Q6P9Z1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd3Q6P9Z1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd3Q6P9Z1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd3Q6P9Z1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd3Q6P9Z1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcd3Q6P9Z1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd3Q6P9Z1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Smarcd3Q6P9Z1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.71■□□□□ 0.27
Smarcd3Q6P9Z1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd3Q6P9Z1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Smarcd3Q6P9Z1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd3Q6P9Z1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd3Q6P9Z1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.71■□□□□ 0.27
Smarcd3Q6P9Z1 Gm43060-201ENSMUST00000200621 289 ntBASIC16.71■□□□□ 0.27
Smarcd3Q6P9Z1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd3Q6P9Z1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd3Q6P9Z1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smarcd3Q6P9Z1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms