Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtl3Q6P1Y1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rtl3Q6P1Y1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtl3Q6P1Y1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rtl3Q6P1Y1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.89■□□□□ 0.61
Rtl3Q6P1Y1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Rtl3Q6P1Y1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rtl3Q6P1Y1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.89■□□□□ 0.61
Rtl3Q6P1Y1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Gm13168-201ENSMUST00000121771 632 ntBASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rtl3Q6P1Y1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtl3Q6P1Y1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtl3Q6P1Y1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.87■□□□□ 0.61
Rtl3Q6P1Y1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtl3Q6P1Y1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rtl3Q6P1Y1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
Rtl3Q6P1Y1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtl3Q6P1Y1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtl3Q6P1Y1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtl3Q6P1Y1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rtl3Q6P1Y1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.87■□□□□ 0.61
Rtl3Q6P1Y1 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.87■□□□□ 0.61
Rtl3Q6P1Y1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rtl3Q6P1Y1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtl3Q6P1Y1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtl3Q6P1Y1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtl3Q6P1Y1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtl3Q6P1Y1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.86■□□□□ 0.61
Rtl3Q6P1Y1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rtl3Q6P1Y1 Gm37856-201ENSMUST00000191634 999 ntBASIC18.86■□□□□ 0.61
Rtl3Q6P1Y1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.86■□□□□ 0.61
Rtl3Q6P1Y1 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.86■□□□□ 0.61
Rtl3Q6P1Y1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtl3Q6P1Y1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtl3Q6P1Y1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rtl3Q6P1Y1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtl3Q6P1Y1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtl3Q6P1Y1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtl3Q6P1Y1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rtl3Q6P1Y1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtl3Q6P1Y1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtl3Q6P1Y1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rtl3Q6P1Y1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.84■□□□□ 0.61
Rtl3Q6P1Y1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rtl3Q6P1Y1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtl3Q6P1Y1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtl3Q6P1Y1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.84■□□□□ 0.61
Rtl3Q6P1Y1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Rtl3Q6P1Y1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtl3Q6P1Y1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rtl3Q6P1Y1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.84■□□□□ 0.61
Rtl3Q6P1Y1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtl3Q6P1Y1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rtl3Q6P1Y1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rtl3Q6P1Y1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtl3Q6P1Y1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Rtl3Q6P1Y1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtl3Q6P1Y1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rtl3Q6P1Y1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtl3Q6P1Y1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Rtl3Q6P1Y1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtl3Q6P1Y1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rtl3Q6P1Y1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtl3Q6P1Y1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms