Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
Best3Q6H1V1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Best3Q6H1V1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Best3Q6H1V1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Best3Q6H1V1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Best3Q6H1V1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Best3Q6H1V1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Best3Q6H1V1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Best3Q6H1V1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Best3Q6H1V1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Best3Q6H1V1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Best3Q6H1V1 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.76■■□□□ 1.07
Best3Q6H1V1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.76■■□□□ 1.07
Best3Q6H1V1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.76■■□□□ 1.07
Best3Q6H1V1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Best3Q6H1V1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Best3Q6H1V1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Best3Q6H1V1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Best3Q6H1V1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Best3Q6H1V1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Best3Q6H1V1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Best3Q6H1V1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Best3Q6H1V1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Best3Q6H1V1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Best3Q6H1V1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Best3Q6H1V1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Best3Q6H1V1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Best3Q6H1V1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Best3Q6H1V1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Best3Q6H1V1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
Best3Q6H1V1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.74■■□□□ 1.07
Best3Q6H1V1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Best3Q6H1V1 AC159205.6-201ENSMUST00000224935 887 ntBASIC21.74■■□□□ 1.07
Best3Q6H1V1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Best3Q6H1V1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.74■■□□□ 1.07
Best3Q6H1V1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.74■■□□□ 1.07
Best3Q6H1V1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Best3Q6H1V1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Best3Q6H1V1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.73■■□□□ 1.07
Best3Q6H1V1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.73■■□□□ 1.07
Best3Q6H1V1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Best3Q6H1V1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Best3Q6H1V1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Best3Q6H1V1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Best3Q6H1V1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Best3Q6H1V1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Best3Q6H1V1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.72■■□□□ 1.07
Best3Q6H1V1 Gm21362-201ENSMUST00000194272 928 ntBASIC21.72■■□□□ 1.07
Best3Q6H1V1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Best3Q6H1V1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.72■■□□□ 1.07
Best3Q6H1V1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Best3Q6H1V1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Best3Q6H1V1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
Best3Q6H1V1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Best3Q6H1V1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Best3Q6H1V1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Best3Q6H1V1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.71■■□□□ 1.07
Best3Q6H1V1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Best3Q6H1V1 Gm18959-201ENSMUST00000208954 655 ntBASIC21.71■■□□□ 1.07
Best3Q6H1V1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Best3Q6H1V1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Best3Q6H1V1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Best3Q6H1V1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Best3Q6H1V1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Best3Q6H1V1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Best3Q6H1V1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Best3Q6H1V1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Best3Q6H1V1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Best3Q6H1V1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Best3Q6H1V1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Best3Q6H1V1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.7■■□□□ 1.06
Best3Q6H1V1 Gm18032-201ENSMUST00000222541 538 ntBASIC21.7■■□□□ 1.06
Best3Q6H1V1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Best3Q6H1V1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Best3Q6H1V1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Best3Q6H1V1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Best3Q6H1V1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Best3Q6H1V1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.69■■□□□ 1.06
Best3Q6H1V1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Best3Q6H1V1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Best3Q6H1V1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Best3Q6H1V1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Best3Q6H1V1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Best3Q6H1V1 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.69■■□□□ 1.06
Best3Q6H1V1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Best3Q6H1V1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.68■■□□□ 1.06
Best3Q6H1V1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Best3Q6H1V1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.68■■□□□ 1.06
Best3Q6H1V1 Gm10819-201ENSMUST00000099988 561 ntBASIC21.68■■□□□ 1.06
Best3Q6H1V1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Best3Q6H1V1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Best3Q6H1V1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.67■■□□□ 1.06
Best3Q6H1V1 Gm27463-201ENSMUST00000183569 57 ntBASIC21.67■■□□□ 1.06
Best3Q6H1V1 Gm10517-202ENSMUST00000192970 758 ntBASIC21.67■■□□□ 1.06
Best3Q6H1V1 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.67■■□□□ 1.06
Best3Q6H1V1 Gm45058-201ENSMUST00000205810 766 ntBASIC21.67■■□□□ 1.06
Best3Q6H1V1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Best3Q6H1V1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Best3Q6H1V1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Best3Q6H1V1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms