Protein–RNA interactions for Protein: Q63739

Ptp4a1, Protein tyrosine phosphatase type IVA 1, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptp4a1Q63739 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ptp4a1Q63739 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptp4a1Q63739 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.4■□□□□ 0.22
Ptp4a1Q63739 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.4■□□□□ 0.22
Ptp4a1Q63739 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
Ptp4a1Q63739 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ptp4a1Q63739 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptp4a1Q63739 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptp4a1Q63739 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ptp4a1Q63739 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.38■□□□□ 0.21
Ptp4a1Q63739 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptp4a1Q63739 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.38■□□□□ 0.21
Ptp4a1Q63739 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptp4a1Q63739 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptp4a1Q63739 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptp4a1Q63739 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ptp4a1Q63739 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptp4a1Q63739 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptp4a1Q63739 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptp4a1Q63739 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ptp4a1Q63739 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptp4a1Q63739 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptp4a1Q63739 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ptp4a1Q63739 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ptp4a1Q63739 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptp4a1Q63739 Gm13146-201ENSMUST00000118508 780 ntBASIC16.37■□□□□ 0.21
Ptp4a1Q63739 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Ptp4a1Q63739 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Ptp4a1Q63739 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptp4a1Q63739 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptp4a1Q63739 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptp4a1Q63739 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptp4a1Q63739 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ptp4a1Q63739 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptp4a1Q63739 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ptp4a1Q63739 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Ptp4a1Q63739 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptp4a1Q63739 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptp4a1Q63739 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.36■□□□□ 0.21
Ptp4a1Q63739 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms