Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Six3Q62233 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Six3Q62233 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six3Q62233 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Six3Q62233 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six3Q62233 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six3Q62233 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.84■□□□□ 0.45
Six3Q62233 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.84■□□□□ 0.45
Six3Q62233 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Six3Q62233 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six3Q62233 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six3Q62233 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Six3Q62233 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Six3Q62233 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Six3Q62233 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six3Q62233 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six3Q62233 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Six3Q62233 Gm10493-201ENSMUST00000097270 612 ntBASIC17.83■□□□□ 0.44
Six3Q62233 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six3Q62233 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Six3Q62233 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six3Q62233 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six3Q62233 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.82■□□□□ 0.44
Six3Q62233 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Six3Q62233 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six3Q62233 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six3Q62233 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Six3Q62233 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six3Q62233 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.82■□□□□ 0.44
Six3Q62233 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six3Q62233 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six3Q62233 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Six3Q62233 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.82■□□□□ 0.44
Six3Q62233 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.82■□□□□ 0.44
Six3Q62233 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.82■□□□□ 0.44
Six3Q62233 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Six3Q62233 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Six3Q62233 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six3Q62233 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six3Q62233 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six3Q62233 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six3Q62233 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Six3Q62233 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Six3Q62233 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Six3Q62233 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six3Q62233 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six3Q62233 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six3Q62233 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Six3Q62233 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six3Q62233 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six3Q62233 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six3Q62233 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Six3Q62233 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six3Q62233 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
Six3Q62233 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Six3Q62233 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.81■□□□□ 0.44
Six3Q62233 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Six3Q62233 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.81■□□□□ 0.44
Six3Q62233 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six3Q62233 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six3Q62233 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Six3Q62233 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Six3Q62233 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Six3Q62233 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.81■□□□□ 0.44
Six3Q62233 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six3Q62233 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Six3Q62233 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.8■□□□□ 0.44
Six3Q62233 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six3Q62233 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six3Q62233 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six3Q62233 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six3Q62233 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six3Q62233 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six3Q62233 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six3Q62233 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Six3Q62233 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six3Q62233 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six3Q62233 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six3Q62233 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Six3Q62233 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Six3Q62233 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six3Q62233 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Six3Q62233 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.79■□□□□ 0.44
Six3Q62233 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six3Q62233 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six3Q62233 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Six3Q62233 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six3Q62233 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six3Q62233 Gm6420-201ENSMUST00000193885 723 ntBASIC17.79■□□□□ 0.44
Six3Q62233 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.79■□□□□ 0.44
Six3Q62233 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six3Q62233 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Six3Q62233 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six3Q62233 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six3Q62233 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Six3Q62233 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six3Q62233 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six3Q62233 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six3Q62233 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six3Q62233 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms