Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn9aQ62205 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn9aQ62205 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scn9aQ62205 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn9aQ62205 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC21.71■■□□□ 1.07
Scn9aQ62205 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn9aQ62205 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Scn9aQ62205 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn9aQ62205 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn9aQ62205 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC21.71■■□□□ 1.07
Scn9aQ62205 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Scn9aQ62205 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn9aQ62205 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn9aQ62205 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.71■■□□□ 1.07
Scn9aQ62205 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scn9aQ62205 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.7■■□□□ 1.07
Scn9aQ62205 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Scn9aQ62205 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
Scn9aQ62205 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Scn9aQ62205 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Scn9aQ62205 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scn9aQ62205 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scn9aQ62205 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.69■■□□□ 1.06
Scn9aQ62205 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn9aQ62205 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn9aQ62205 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Scn9aQ62205 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Scn9aQ62205 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Scn9aQ62205 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn9aQ62205 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn9aQ62205 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn9aQ62205 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.69■■□□□ 1.06
Scn9aQ62205 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scn9aQ62205 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
Scn9aQ62205 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Scn9aQ62205 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Scn9aQ62205 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Scn9aQ62205 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.68■■□□□ 1.06
Scn9aQ62205 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.68■■□□□ 1.06
Scn9aQ62205 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.68■■□□□ 1.06
Scn9aQ62205 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.68■■□□□ 1.06
Scn9aQ62205 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.68■■□□□ 1.06
Scn9aQ62205 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scn9aQ62205 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scn9aQ62205 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Scn9aQ62205 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
Scn9aQ62205 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scn9aQ62205 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.67■■□□□ 1.06
Scn9aQ62205 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Scn9aQ62205 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Scn9aQ62205 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scn9aQ62205 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Scn9aQ62205 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Scn9aQ62205 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.67■■□□□ 1.06
Scn9aQ62205 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scn9aQ62205 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scn9aQ62205 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.66■■□□□ 1.06
Scn9aQ62205 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Scn9aQ62205 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Scn9aQ62205 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Scn9aQ62205 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn9aQ62205 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn9aQ62205 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scn9aQ62205 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC21.65■■□□□ 1.06
Scn9aQ62205 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Scn9aQ62205 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Scn9aQ62205 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scn9aQ62205 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.64■■□□□ 1.05
Scn9aQ62205 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scn9aQ62205 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.64■■□□□ 1.05
Scn9aQ62205 Gm27463-201ENSMUST00000183569 57 ntBASIC21.64■■□□□ 1.05
Scn9aQ62205 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Scn9aQ62205 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.63■■□□□ 1.05
Scn9aQ62205 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Scn9aQ62205 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC21.63■■□□□ 1.05
Scn9aQ62205 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn9aQ62205 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.63■■□□□ 1.05
Scn9aQ62205 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn9aQ62205 Gm18101-201ENSMUST00000215769 548 ntBASIC21.63■■□□□ 1.05
Scn9aQ62205 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC21.63■■□□□ 1.05
Scn9aQ62205 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn9aQ62205 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scn9aQ62205 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms