Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VcanQ62059 Gm15375-201ENSMUST00000119510 849 ntBASIC17.26■□□□□ 0.35
VcanQ62059 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VcanQ62059 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VcanQ62059 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.26■□□□□ 0.35
VcanQ62059 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VcanQ62059 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.26■□□□□ 0.35
VcanQ62059 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VcanQ62059 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.26■□□□□ 0.35
VcanQ62059 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VcanQ62059 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.26■□□□□ 0.35
VcanQ62059 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VcanQ62059 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VcanQ62059 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VcanQ62059 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VcanQ62059 Flg-201ENSMUST00000050758 1488 ntBASIC17.25■□□□□ 0.35
VcanQ62059 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VcanQ62059 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VcanQ62059 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VcanQ62059 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VcanQ62059 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
VcanQ62059 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VcanQ62059 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VcanQ62059 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VcanQ62059 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.24■□□□□ 0.35
VcanQ62059 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VcanQ62059 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.24■□□□□ 0.35
VcanQ62059 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VcanQ62059 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
VcanQ62059 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
VcanQ62059 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
VcanQ62059 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
VcanQ62059 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VcanQ62059 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VcanQ62059 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VcanQ62059 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VcanQ62059 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.24■□□□□ 0.35
VcanQ62059 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VcanQ62059 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VcanQ62059 Gm29518-201ENSMUST00000190858 372 ntBASIC17.23■□□□□ 0.35
VcanQ62059 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.23■□□□□ 0.35
VcanQ62059 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VcanQ62059 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.23■□□□□ 0.35
VcanQ62059 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VcanQ62059 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.23■□□□□ 0.35
VcanQ62059 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VcanQ62059 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VcanQ62059 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VcanQ62059 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.23■□□□□ 0.35
VcanQ62059 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VcanQ62059 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.23■□□□□ 0.35
VcanQ62059 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VcanQ62059 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VcanQ62059 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VcanQ62059 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VcanQ62059 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VcanQ62059 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VcanQ62059 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VcanQ62059 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.22■□□□□ 0.35
VcanQ62059 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VcanQ62059 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VcanQ62059 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VcanQ62059 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VcanQ62059 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VcanQ62059 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VcanQ62059 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VcanQ62059 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VcanQ62059 Golph3-202ENSMUST00000226517 2359 ntBASIC17.21■□□□□ 0.35
VcanQ62059 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VcanQ62059 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VcanQ62059 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.21■□□□□ 0.35
VcanQ62059 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VcanQ62059 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.21■□□□□ 0.35
VcanQ62059 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.21■□□□□ 0.35
VcanQ62059 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VcanQ62059 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VcanQ62059 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
VcanQ62059 Gm18958-201ENSMUST00000174258 762 ntBASIC17.2■□□□□ 0.34
VcanQ62059 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.2■□□□□ 0.34
VcanQ62059 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.2■□□□□ 0.34
VcanQ62059 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.2■□□□□ 0.34
VcanQ62059 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VcanQ62059 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VcanQ62059 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VcanQ62059 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VcanQ62059 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VcanQ62059 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VcanQ62059 Gm5587-201ENSMUST00000206270 674 ntBASIC17.2■□□□□ 0.34
VcanQ62059 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VcanQ62059 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
VcanQ62059 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VcanQ62059 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VcanQ62059 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
VcanQ62059 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.19■□□□□ 0.34
VcanQ62059 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VcanQ62059 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VcanQ62059 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VcanQ62059 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VcanQ62059 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
VcanQ62059 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms