Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Foxc2Q61850 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc2Q61850 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.39□□□□□ -0.11
Foxc2Q61850 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.39□□□□□ -0.11
Foxc2Q61850 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Foxc2Q61850 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.39□□□□□ -0.11
Foxc2Q61850 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc2Q61850 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc2Q61850 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc2Q61850 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc2Q61850 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc2Q61850 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc2Q61850 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc2Q61850 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Foxc2Q61850 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc2Q61850 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc2Q61850 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc2Q61850 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Foxc2Q61850 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Foxc2Q61850 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Foxc2Q61850 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Foxc2Q61850 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.38□□□□□ -0.11
Foxc2Q61850 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Foxc2Q61850 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.38□□□□□ -0.11
Foxc2Q61850 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.38□□□□□ -0.11
Foxc2Q61850 Gm37179-201ENSMUST00000194862 823 ntBASIC14.38□□□□□ -0.11
Foxc2Q61850 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.38□□□□□ -0.11
Foxc2Q61850 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.38□□□□□ -0.11
Foxc2Q61850 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Foxc2Q61850 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Foxc2Q61850 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc2Q61850 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc2Q61850 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc2Q61850 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc2Q61850 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc2Q61850 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc2Q61850 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Foxc2Q61850 Gm13534-201ENSMUST00000121169 513 ntBASIC14.37□□□□□ -0.11
Foxc2Q61850 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.37□□□□□ -0.11
Foxc2Q61850 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc2Q61850 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc2Q61850 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.37□□□□□ -0.11
Foxc2Q61850 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Foxc2Q61850 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.37□□□□□ -0.11
Foxc2Q61850 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Foxc2Q61850 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Foxc2Q61850 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Foxc2Q61850 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc2Q61850 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Foxc2Q61850 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc2Q61850 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Foxc2Q61850 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc2Q61850 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc2Q61850 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Foxc2Q61850 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Foxc2Q61850 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc2Q61850 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc2Q61850 Gm6420-201ENSMUST00000193885 723 ntBASIC14.36□□□□□ -0.11
Foxc2Q61850 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Foxc2Q61850 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.36□□□□□ -0.11
Foxc2Q61850 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc2Q61850 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc2Q61850 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc2Q61850 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc2Q61850 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc2Q61850 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc2Q61850 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Foxc2Q61850 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc2Q61850 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Foxc2Q61850 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.36□□□□□ -0.11
Foxc2Q61850 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
Foxc2Q61850 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Foxc2Q61850 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxc2Q61850 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Foxc2Q61850 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxc2Q61850 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Foxc2Q61850 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxc2Q61850 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxc2Q61850 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxc2Q61850 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.35□□□□□ -0.11
Foxc2Q61850 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms