Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.72■□□□□ 0.43
Rai1Q61818 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rai1Q61818 Mir2861-201ENSMUST00000175539 82 ntBASIC17.72■□□□□ 0.43
Rai1Q61818 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Rai1Q61818 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rai1Q61818 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rai1Q61818 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rai1Q61818 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rai1Q61818 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.71■□□□□ 0.43
Rai1Q61818 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rai1Q61818 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rai1Q61818 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rai1Q61818 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.71■□□□□ 0.43
Rai1Q61818 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rai1Q61818 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rai1Q61818 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rai1Q61818 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rai1Q61818 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rai1Q61818 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.71■□□□□ 0.43
Rai1Q61818 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rai1Q61818 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.71■□□□□ 0.43
Rai1Q61818 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rai1Q61818 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Rai1Q61818 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rai1Q61818 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Rai1Q61818 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rai1Q61818 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rai1Q61818 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rai1Q61818 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rai1Q61818 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rai1Q61818 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rai1Q61818 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.7■□□□□ 0.42
Rai1Q61818 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rai1Q61818 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rai1Q61818 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rai1Q61818 Gm12085-201ENSMUST00000119263 940 ntBASIC17.69■□□□□ 0.42
Rai1Q61818 Gm18032-201ENSMUST00000222541 538 ntBASIC17.69■□□□□ 0.42
Rai1Q61818 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rai1Q61818 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rai1Q61818 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rai1Q61818 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rai1Q61818 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rai1Q61818 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rai1Q61818 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rai1Q61818 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rai1Q61818 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rai1Q61818 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rai1Q61818 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rai1Q61818 Gm7367-201ENSMUST00000057611 492 ntBASIC17.69■□□□□ 0.42
Rai1Q61818 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rai1Q61818 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.69■□□□□ 0.42
Rai1Q61818 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rai1Q61818 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rai1Q61818 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rai1Q61818 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rai1Q61818 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.68■□□□□ 0.42
Rai1Q61818 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.68■□□□□ 0.42
Rai1Q61818 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.68■□□□□ 0.42
Rai1Q61818 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rai1Q61818 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.68■□□□□ 0.42
Rai1Q61818 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rai1Q61818 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rai1Q61818 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rai1Q61818 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rai1Q61818 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rai1Q61818 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Rai1Q61818 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.68■□□□□ 0.42
Rai1Q61818 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rai1Q61818 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rai1Q61818 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rai1Q61818 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.67■□□□□ 0.42
Rai1Q61818 Gm18959-201ENSMUST00000208954 655 ntBASIC17.67■□□□□ 0.42
Rai1Q61818 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rai1Q61818 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rai1Q61818 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rai1Q61818 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rai1Q61818 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rai1Q61818 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rai1Q61818 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rai1Q61818 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rai1Q61818 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rai1Q61818 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.67■□□□□ 0.42
Rai1Q61818 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rai1Q61818 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Rai1Q61818 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Rai1Q61818 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rai1Q61818 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.66■□□□□ 0.42
Rai1Q61818 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.66■□□□□ 0.42
Rai1Q61818 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rai1Q61818 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rai1Q61818 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rai1Q61818 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.65■□□□□ 0.42
Rai1Q61818 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rai1Q61818 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rai1Q61818 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rai1Q61818 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rai1Q61818 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rai1Q61818 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rai1Q61818 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rai1Q61818 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms