Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Clcn4Q61418 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn4Q61418 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn4Q61418 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn4Q61418 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.8■□□□□ 0.28
Clcn4Q61418 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn4Q61418 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn4Q61418 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn4Q61418 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn4Q61418 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn4Q61418 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.8■□□□□ 0.28
Clcn4Q61418 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.8■□□□□ 0.28
Clcn4Q61418 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.8■□□□□ 0.28
Clcn4Q61418 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn4Q61418 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn4Q61418 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn4Q61418 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Clcn4Q61418 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Clcn4Q61418 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Clcn4Q61418 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.8■□□□□ 0.28
Clcn4Q61418 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn4Q61418 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn4Q61418 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn4Q61418 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn4Q61418 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn4Q61418 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcn4Q61418 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn4Q61418 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn4Q61418 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn4Q61418 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.79■□□□□ 0.28
Clcn4Q61418 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn4Q61418 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn4Q61418 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Clcn4Q61418 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.79■□□□□ 0.28
Clcn4Q61418 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.79■□□□□ 0.28
Clcn4Q61418 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn4Q61418 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn4Q61418 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn4Q61418 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn4Q61418 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn4Q61418 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn4Q61418 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn4Q61418 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn4Q61418 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn4Q61418 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn4Q61418 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcn4Q61418 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn4Q61418 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn4Q61418 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn4Q61418 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.78■□□□□ 0.28
Clcn4Q61418 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn4Q61418 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn4Q61418 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn4Q61418 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn4Q61418 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn4Q61418 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.78■□□□□ 0.28
Clcn4Q61418 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn4Q61418 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn4Q61418 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn4Q61418 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn4Q61418 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Clcn4Q61418 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn4Q61418 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcn4Q61418 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn4Q61418 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn4Q61418 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn4Q61418 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Clcn4Q61418 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.77■□□□□ 0.28
Clcn4Q61418 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn4Q61418 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn4Q61418 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Clcn4Q61418 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Clcn4Q61418 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcn4Q61418 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clcn4Q61418 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clcn4Q61418 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.77■□□□□ 0.27
Clcn4Q61418 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clcn4Q61418 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Clcn4Q61418 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.76■□□□□ 0.27
Clcn4Q61418 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.76■□□□□ 0.27
Clcn4Q61418 Gm38205-201ENSMUST00000192243 258 ntBASIC16.76■□□□□ 0.27
Clcn4Q61418 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.76■□□□□ 0.27
Clcn4Q61418 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.76■□□□□ 0.27
Clcn4Q61418 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms