Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Timm23-208ENSMUST00000226683 750 ntBASIC20.14■□□□□ 0.81
Cln3Q61124 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cln3Q61124 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.14■□□□□ 0.81
Cln3Q61124 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.14■□□□□ 0.81
Cln3Q61124 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.14■□□□□ 0.81
Cln3Q61124 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cln3Q61124 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cln3Q61124 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cln3Q61124 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cln3Q61124 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cln3Q61124 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cln3Q61124 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.13■□□□□ 0.81
Cln3Q61124 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.13■□□□□ 0.81
Cln3Q61124 Gm7889-201ENSMUST00000185591 958 ntBASIC20.13■□□□□ 0.81
Cln3Q61124 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cln3Q61124 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.13■□□□□ 0.81
Cln3Q61124 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cln3Q61124 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cln3Q61124 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Cln3Q61124 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cln3Q61124 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cln3Q61124 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cln3Q61124 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cln3Q61124 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.12■□□□□ 0.81
Cln3Q61124 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cln3Q61124 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.12■□□□□ 0.81
Cln3Q61124 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cln3Q61124 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cln3Q61124 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cln3Q61124 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cln3Q61124 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cln3Q61124 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.11■□□□□ 0.81
Cln3Q61124 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cln3Q61124 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cln3Q61124 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.11■□□□□ 0.81
Cln3Q61124 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.11■□□□□ 0.81
Cln3Q61124 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cln3Q61124 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cln3Q61124 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.11■□□□□ 0.81
Cln3Q61124 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cln3Q61124 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cln3Q61124 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cln3Q61124 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cln3Q61124 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.11■□□□□ 0.81
Cln3Q61124 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cln3Q61124 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cln3Q61124 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cln3Q61124 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cln3Q61124 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cln3Q61124 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Cln3Q61124 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.1■□□□□ 0.81
Cln3Q61124 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cln3Q61124 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cln3Q61124 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cln3Q61124 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.09■□□□□ 0.81
Cln3Q61124 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cln3Q61124 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cln3Q61124 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Cln3Q61124 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cln3Q61124 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cln3Q61124 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Cln3Q61124 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cln3Q61124 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cln3Q61124 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cln3Q61124 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cln3Q61124 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cln3Q61124 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cln3Q61124 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cln3Q61124 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cln3Q61124 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cln3Q61124 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cln3Q61124 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cln3Q61124 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cln3Q61124 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cln3Q61124 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cln3Q61124 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cln3Q61124 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.08■□□□□ 0.81
Cln3Q61124 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cln3Q61124 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Cln3Q61124 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cln3Q61124 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Cln3Q61124 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cln3Q61124 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cln3Q61124 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cln3Q61124 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
Cln3Q61124 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cln3Q61124 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cln3Q61124 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cln3Q61124 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.07■□□□□ 0.8
Cln3Q61124 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cln3Q61124 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cln3Q61124 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cln3Q61124 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Cln3Q61124 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cln3Q61124 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cln3Q61124 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cln3Q61124 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cln3Q61124 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cln3Q61124 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cln3Q61124 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms