Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm44771-201ENSMUST00000206975 626 ntBASIC26.58■■□□□ 1.85
Ptch1Q61115 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ptch1Q61115 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ptch1Q61115 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ptch1Q61115 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ptch1Q61115 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ptch1Q61115 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Ptch1Q61115 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ptch1Q61115 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Ptch1Q61115 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Ptch1Q61115 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ptch1Q61115 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
Ptch1Q61115 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Ptch1Q61115 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ptch1Q61115 Gm17807-201ENSMUST00000186869 298 ntBASIC26.56■■□□□ 1.84
Ptch1Q61115 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ptch1Q61115 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ptch1Q61115 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC26.56■■□□□ 1.84
Ptch1Q61115 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ptch1Q61115 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC26.55■■□□□ 1.84
Ptch1Q61115 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ptch1Q61115 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ptch1Q61115 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Ptch1Q61115 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ptch1Q61115 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ptch1Q61115 Gm16061-201ENSMUST00000122167 857 ntBASIC26.55■■□□□ 1.84
Ptch1Q61115 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
Ptch1Q61115 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Ptch1Q61115 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ptch1Q61115 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Ptch1Q61115 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ptch1Q61115 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC26.54■■□□□ 1.84
Ptch1Q61115 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Ptch1Q61115 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ptch1Q61115 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC26.54■■□□□ 1.84
Ptch1Q61115 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ptch1Q61115 Gm7153-201ENSMUST00000117092 455 ntBASIC26.54■■□□□ 1.84
Ptch1Q61115 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC26.54■■□□□ 1.84
Ptch1Q61115 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Ptch1Q61115 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Ptch1Q61115 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ptch1Q61115 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ptch1Q61115 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ptch1Q61115 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ptch1Q61115 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ptch1Q61115 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ptch1Q61115 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ptch1Q61115 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ptch1Q61115 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ptch1Q61115 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ptch1Q61115 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ptch1Q61115 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC26.53■■□□□ 1.84
Ptch1Q61115 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ptch1Q61115 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ptch1Q61115 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ptch1Q61115 Gm5587-201ENSMUST00000206270 674 ntBASIC26.52■■□□□ 1.84
Ptch1Q61115 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC26.52■■□□□ 1.84
Ptch1Q61115 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Ptch1Q61115 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ptch1Q61115 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Ptch1Q61115 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ptch1Q61115 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ptch1Q61115 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ptch1Q61115 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ptch1Q61115 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ptch1Q61115 Gm29518-201ENSMUST00000190858 372 ntBASIC26.51■■□□□ 1.83
Ptch1Q61115 Gm18669-201ENSMUST00000216049 778 ntBASIC26.51■■□□□ 1.83
Ptch1Q61115 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ptch1Q61115 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ptch1Q61115 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ptch1Q61115 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC26.5■■□□□ 1.83
Ptch1Q61115 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ptch1Q61115 Gm7370-201ENSMUST00000219471 767 ntBASIC26.5■■□□□ 1.83
Ptch1Q61115 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ptch1Q61115 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ptch1Q61115 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Ptch1Q61115 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ptch1Q61115 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ptch1Q61115 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ptch1Q61115 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Ptch1Q61115 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ptch1Q61115 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ptch1Q61115 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ptch1Q61115 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ptch1Q61115 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ptch1Q61115 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ptch1Q61115 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ptch1Q61115 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ptch1Q61115 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptch1Q61115 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC26.48■■□□□ 1.83
Ptch1Q61115 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ptch1Q61115 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ptch1Q61115 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptch1Q61115 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptch1Q61115 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptch1Q61115 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptch1Q61115 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptch1Q61115 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Ptch1Q61115 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptch1Q61115 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms