Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trpc1Q61056 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trpc1Q61056 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trpc1Q61056 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trpc1Q61056 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trpc1Q61056 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.77■□□□□ 0.44
Trpc1Q61056 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trpc1Q61056 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trpc1Q61056 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.77■□□□□ 0.44
Trpc1Q61056 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.77■□□□□ 0.44
Trpc1Q61056 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.77■□□□□ 0.44
Trpc1Q61056 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trpc1Q61056 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trpc1Q61056 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.77■□□□□ 0.43
Trpc1Q61056 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.76■□□□□ 0.43
Trpc1Q61056 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trpc1Q61056 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trpc1Q61056 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trpc1Q61056 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trpc1Q61056 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trpc1Q61056 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trpc1Q61056 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trpc1Q61056 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trpc1Q61056 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trpc1Q61056 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.76■□□□□ 0.43
Trpc1Q61056 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trpc1Q61056 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trpc1Q61056 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trpc1Q61056 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trpc1Q61056 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trpc1Q61056 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trpc1Q61056 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.75■□□□□ 0.43
Trpc1Q61056 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trpc1Q61056 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trpc1Q61056 Gm8495-201ENSMUST00000188740 694 ntBASIC17.75■□□□□ 0.43
Trpc1Q61056 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trpc1Q61056 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trpc1Q61056 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trpc1Q61056 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trpc1Q61056 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trpc1Q61056 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Trpc1Q61056 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.75■□□□□ 0.43
Trpc1Q61056 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trpc1Q61056 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.74■□□□□ 0.43
Trpc1Q61056 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trpc1Q61056 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trpc1Q61056 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trpc1Q61056 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Trpc1Q61056 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trpc1Q61056 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trpc1Q61056 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trpc1Q61056 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.74■□□□□ 0.43
Trpc1Q61056 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trpc1Q61056 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trpc1Q61056 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trpc1Q61056 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trpc1Q61056 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trpc1Q61056 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.73■□□□□ 0.43
Trpc1Q61056 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trpc1Q61056 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trpc1Q61056 Gm5874-201ENSMUST00000096101 508 ntBASIC17.73■□□□□ 0.43
Trpc1Q61056 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trpc1Q61056 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.73■□□□□ 0.43
Trpc1Q61056 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trpc1Q61056 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trpc1Q61056 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trpc1Q61056 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trpc1Q61056 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trpc1Q61056 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.73■□□□□ 0.43
Trpc1Q61056 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trpc1Q61056 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trpc1Q61056 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trpc1Q61056 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trpc1Q61056 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trpc1Q61056 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trpc1Q61056 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trpc1Q61056 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trpc1Q61056 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trpc1Q61056 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trpc1Q61056 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trpc1Q61056 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trpc1Q61056 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trpc1Q61056 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trpc1Q61056 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trpc1Q61056 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trpc1Q61056 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trpc1Q61056 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trpc1Q61056 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trpc1Q61056 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trpc1Q61056 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trpc1Q61056 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Trpc1Q61056 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trpc1Q61056 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.71■□□□□ 0.43
Trpc1Q61056 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms