Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.2■□□□□ 0.5
Col12a1Q60847 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col12a1Q60847 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.2■□□□□ 0.5
Col12a1Q60847 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Col12a1Q60847 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col12a1Q60847 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col12a1Q60847 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.2■□□□□ 0.5
Col12a1Q60847 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col12a1Q60847 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.2■□□□□ 0.5
Col12a1Q60847 Mzt1-203ENSMUST00000227948 952 ntBASIC18.2■□□□□ 0.5
Col12a1Q60847 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col12a1Q60847 Gm34391-201ENSMUST00000203706 907 ntBASIC18.19■□□□□ 0.5
Col12a1Q60847 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.19■□□□□ 0.5
Col12a1Q60847 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.19■□□□□ 0.5
Col12a1Q60847 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col12a1Q60847 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col12a1Q60847 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col12a1Q60847 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Col12a1Q60847 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col12a1Q60847 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col12a1Q60847 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col12a1Q60847 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col12a1Q60847 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.19■□□□□ 0.5
Col12a1Q60847 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Col12a1Q60847 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.18■□□□□ 0.5
Col12a1Q60847 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.18■□□□□ 0.5
Col12a1Q60847 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col12a1Q60847 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col12a1Q60847 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col12a1Q60847 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.18■□□□□ 0.5
Col12a1Q60847 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col12a1Q60847 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.18■□□□□ 0.5
Col12a1Q60847 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col12a1Q60847 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col12a1Q60847 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Col12a1Q60847 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.18■□□□□ 0.5
Col12a1Q60847 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.18■□□□□ 0.5
Col12a1Q60847 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col12a1Q60847 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col12a1Q60847 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col12a1Q60847 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col12a1Q60847 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Col12a1Q60847 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.17■□□□□ 0.5
Col12a1Q60847 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col12a1Q60847 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col12a1Q60847 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.17■□□□□ 0.5
Col12a1Q60847 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col12a1Q60847 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col12a1Q60847 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col12a1Q60847 Gm24589-201ENSMUST00000116692 94 ntBASIC18.16■□□□□ 0.5
Col12a1Q60847 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.16■□□□□ 0.5
Col12a1Q60847 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col12a1Q60847 Gm27463-201ENSMUST00000183569 57 ntBASIC18.16■□□□□ 0.5
Col12a1Q60847 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Col12a1Q60847 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col12a1Q60847 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col12a1Q60847 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col12a1Q60847 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col12a1Q60847 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col12a1Q60847 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col12a1Q60847 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.15■□□□□ 0.5
Col12a1Q60847 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Col12a1Q60847 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.15■□□□□ 0.5
Col12a1Q60847 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.15■□□□□ 0.5
Col12a1Q60847 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col12a1Q60847 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col12a1Q60847 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col12a1Q60847 Gm38027-201ENSMUST00000192315 235 ntBASIC18.15■□□□□ 0.5
Col12a1Q60847 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col12a1Q60847 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col12a1Q60847 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col12a1Q60847 Gm27525-201ENSMUST00000184465 107 ntBASIC18.14■□□□□ 0.5
Col12a1Q60847 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col12a1Q60847 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.14■□□□□ 0.49
Col12a1Q60847 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col12a1Q60847 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col12a1Q60847 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col12a1Q60847 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col12a1Q60847 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col12a1Q60847 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Col12a1Q60847 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.14■□□□□ 0.49
Col12a1Q60847 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col12a1Q60847 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col12a1Q60847 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col12a1Q60847 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col12a1Q60847 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col12a1Q60847 Mir6349-201ENSMUST00000184059 97 ntBASIC18.13■□□□□ 0.49
Col12a1Q60847 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col12a1Q60847 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.13■□□□□ 0.49
Col12a1Q60847 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col12a1Q60847 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col12a1Q60847 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col12a1Q60847 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Col12a1Q60847 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Col12a1Q60847 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Col12a1Q60847 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col12a1Q60847 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col12a1Q60847 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.12■□□□□ 0.49
Col12a1Q60847 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Col12a1Q60847 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms