Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ClpbQ60649 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpbQ60649 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.49■□□□□ 0.39
ClpbQ60649 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpbQ60649 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpbQ60649 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ClpbQ60649 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ClpbQ60649 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ClpbQ60649 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpbQ60649 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ClpbQ60649 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.49■□□□□ 0.39
ClpbQ60649 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ClpbQ60649 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpbQ60649 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpbQ60649 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpbQ60649 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
ClpbQ60649 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClpbQ60649 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClpbQ60649 Gm6211-202ENSMUST00000167849 925 ntBASIC17.48■□□□□ 0.39
ClpbQ60649 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ClpbQ60649 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClpbQ60649 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClpbQ60649 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClpbQ60649 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClpbQ60649 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClpbQ60649 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClpbQ60649 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.48■□□□□ 0.39
ClpbQ60649 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ClpbQ60649 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ClpbQ60649 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ClpbQ60649 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ClpbQ60649 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ClpbQ60649 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClpbQ60649 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClpbQ60649 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ClpbQ60649 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ClpbQ60649 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClpbQ60649 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClpbQ60649 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ClpbQ60649 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClpbQ60649 Gm5408-201ENSMUST00000197998 747 ntBASIC17.46■□□□□ 0.39
ClpbQ60649 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClpbQ60649 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClpbQ60649 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClpbQ60649 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ClpbQ60649 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClpbQ60649 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ClpbQ60649 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.46■□□□□ 0.39
ClpbQ60649 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ClpbQ60649 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ClpbQ60649 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
ClpbQ60649 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ClpbQ60649 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ClpbQ60649 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClpbQ60649 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.45■□□□□ 0.38
ClpbQ60649 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClpbQ60649 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClpbQ60649 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClpbQ60649 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClpbQ60649 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.45■□□□□ 0.38
ClpbQ60649 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClpbQ60649 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClpbQ60649 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.45■□□□□ 0.38
ClpbQ60649 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.45■□□□□ 0.38
ClpbQ60649 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.45■□□□□ 0.38
ClpbQ60649 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ClpbQ60649 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.45■□□□□ 0.38
ClpbQ60649 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.45■□□□□ 0.38
ClpbQ60649 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ClpbQ60649 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClpbQ60649 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClpbQ60649 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClpbQ60649 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.44■□□□□ 0.38
ClpbQ60649 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClpbQ60649 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClpbQ60649 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClpbQ60649 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ClpbQ60649 Gm13148-201ENSMUST00000118892 745 ntBASIC17.44■□□□□ 0.38
ClpbQ60649 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.44■□□□□ 0.38
ClpbQ60649 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms