Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h4Q60641 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.4■□□□□ 0.38
Nr1h4Q60641 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h4Q60641 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Nr1h4Q60641 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h4Q60641 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h4Q60641 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h4Q60641 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.4■□□□□ 0.38
Nr1h4Q60641 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h4Q60641 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h4Q60641 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h4Q60641 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.4■□□□□ 0.38
Nr1h4Q60641 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Nr1h4Q60641 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.39■□□□□ 0.38
Nr1h4Q60641 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nr1h4Q60641 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h4Q60641 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.39■□□□□ 0.37
Nr1h4Q60641 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h4Q60641 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h4Q60641 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h4Q60641 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nr1h4Q60641 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nr1h4Q60641 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nr1h4Q60641 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h4Q60641 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h4Q60641 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h4Q60641 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h4Q60641 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h4Q60641 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h4Q60641 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.38■□□□□ 0.37
Nr1h4Q60641 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nr1h4Q60641 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nr1h4Q60641 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h4Q60641 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.38■□□□□ 0.37
Nr1h4Q60641 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h4Q60641 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h4Q60641 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h4Q60641 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nr1h4Q60641 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nr1h4Q60641 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h4Q60641 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h4Q60641 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.37■□□□□ 0.37
Nr1h4Q60641 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h4Q60641 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h4Q60641 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h4Q60641 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h4Q60641 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h4Q60641 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h4Q60641 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Nr1h4Q60641 Gm21956-201ENSMUST00000179946 522 ntBASIC17.36■□□□□ 0.37
Nr1h4Q60641 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h4Q60641 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h4Q60641 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h4Q60641 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h4Q60641 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h4Q60641 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h4Q60641 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.36■□□□□ 0.37
Nr1h4Q60641 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h4Q60641 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nr1h4Q60641 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Nr1h4Q60641 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h4Q60641 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h4Q60641 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h4Q60641 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.35■□□□□ 0.37
Nr1h4Q60641 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h4Q60641 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h4Q60641 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h4Q60641 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h4Q60641 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h4Q60641 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h4Q60641 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
Nr1h4Q60641 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.35■□□□□ 0.37
Nr1h4Q60641 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h4Q60641 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h4Q60641 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h4Q60641 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nr1h4Q60641 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nr1h4Q60641 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nr1h4Q60641 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nr1h4Q60641 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms