Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Xrcc1Q60596 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Xrcc1Q60596 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Xrcc1Q60596 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Xrcc1Q60596 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Xrcc1Q60596 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Xrcc1Q60596 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Xrcc1Q60596 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Xrcc1Q60596 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Xrcc1Q60596 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Xrcc1Q60596 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.45■□□□□ 0.38
Xrcc1Q60596 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.45■□□□□ 0.38
Xrcc1Q60596 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Xrcc1Q60596 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Xrcc1Q60596 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Xrcc1Q60596 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Xrcc1Q60596 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Xrcc1Q60596 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Xrcc1Q60596 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Xrcc1Q60596 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Xrcc1Q60596 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Xrcc1Q60596 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Xrcc1Q60596 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.44■□□□□ 0.38
Xrcc1Q60596 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.44■□□□□ 0.38
Xrcc1Q60596 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.44■□□□□ 0.38
Xrcc1Q60596 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Xrcc1Q60596 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Xrcc1Q60596 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Xrcc1Q60596 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Xrcc1Q60596 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Xrcc1Q60596 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Xrcc1Q60596 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Xrcc1Q60596 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Xrcc1Q60596 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Xrcc1Q60596 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Xrcc1Q60596 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Xrcc1Q60596 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Xrcc1Q60596 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Xrcc1Q60596 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Xrcc1Q60596 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Xrcc1Q60596 Gm12527-201ENSMUST00000117967 564 ntBASIC17.43■□□□□ 0.38
Xrcc1Q60596 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.43■□□□□ 0.38
Xrcc1Q60596 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Xrcc1Q60596 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Xrcc1Q60596 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Xrcc1Q60596 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Xrcc1Q60596 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Xrcc1Q60596 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Xrcc1Q60596 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Xrcc1Q60596 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Xrcc1Q60596 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Xrcc1Q60596 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Xrcc1Q60596 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Xrcc1Q60596 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.42■□□□□ 0.38
Xrcc1Q60596 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.42■□□□□ 0.38
Xrcc1Q60596 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Xrcc1Q60596 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.42■□□□□ 0.38
Xrcc1Q60596 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.42■□□□□ 0.38
Xrcc1Q60596 Gm20049-201ENSMUST00000219950 730 ntBASIC17.42■□□□□ 0.38
Xrcc1Q60596 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Xrcc1Q60596 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Xrcc1Q60596 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Xrcc1Q60596 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.42■□□□□ 0.38
Xrcc1Q60596 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.41■□□□□ 0.38
Xrcc1Q60596 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Xrcc1Q60596 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Xrcc1Q60596 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Xrcc1Q60596 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Xrcc1Q60596 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.4■□□□□ 0.38
Xrcc1Q60596 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.4■□□□□ 0.38
Xrcc1Q60596 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Xrcc1Q60596 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Xrcc1Q60596 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Xrcc1Q60596 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Xrcc1Q60596 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms