Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.21□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gm8969-201ENSMUST00000199694 526 ntBASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Spcs1-204ENSMUST00000226782 949 ntBASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.19□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms