Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.09■□□□□ 0.49
Scn2bQ56A07 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn2bQ56A07 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn2bQ56A07 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn2bQ56A07 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn2bQ56A07 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn2bQ56A07 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn2bQ56A07 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Scn2bQ56A07 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn2bQ56A07 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn2bQ56A07 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn2bQ56A07 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Scn2bQ56A07 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Scn2bQ56A07 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn2bQ56A07 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.08■□□□□ 0.49
Scn2bQ56A07 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Scn2bQ56A07 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn2bQ56A07 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn2bQ56A07 Gm18671-201ENSMUST00000214826 683 ntBASIC18.08■□□□□ 0.48
Scn2bQ56A07 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn2bQ56A07 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Scn2bQ56A07 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Scn2bQ56A07 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Scn2bQ56A07 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn2bQ56A07 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn2bQ56A07 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn2bQ56A07 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.08■□□□□ 0.48
Scn2bQ56A07 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Scn2bQ56A07 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn2bQ56A07 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn2bQ56A07 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn2bQ56A07 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn2bQ56A07 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn2bQ56A07 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Scn2bQ56A07 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn2bQ56A07 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn2bQ56A07 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn2bQ56A07 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn2bQ56A07 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.07■□□□□ 0.48
Scn2bQ56A07 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn2bQ56A07 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn2bQ56A07 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn2bQ56A07 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn2bQ56A07 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scn2bQ56A07 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn2bQ56A07 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Scn2bQ56A07 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn2bQ56A07 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn2bQ56A07 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Scn2bQ56A07 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn2bQ56A07 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.06■□□□□ 0.48
Scn2bQ56A07 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.06■□□□□ 0.48
Scn2bQ56A07 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn2bQ56A07 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn2bQ56A07 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn2bQ56A07 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.06■□□□□ 0.48
Scn2bQ56A07 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn2bQ56A07 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn2bQ56A07 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.05■□□□□ 0.48
Scn2bQ56A07 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scn2bQ56A07 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.05■□□□□ 0.48
Scn2bQ56A07 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn2bQ56A07 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.05■□□□□ 0.48
Scn2bQ56A07 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn2bQ56A07 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.05■□□□□ 0.48
Scn2bQ56A07 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scn2bQ56A07 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn2bQ56A07 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn2bQ56A07 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn2bQ56A07 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn2bQ56A07 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn2bQ56A07 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn2bQ56A07 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn2bQ56A07 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn2bQ56A07 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn2bQ56A07 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn2bQ56A07 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.04■□□□□ 0.48
Scn2bQ56A07 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn2bQ56A07 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn2bQ56A07 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn2bQ56A07 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn2bQ56A07 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn2bQ56A07 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn2bQ56A07 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn2bQ56A07 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Scn2bQ56A07 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.03■□□□□ 0.48
Scn2bQ56A07 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.03■□□□□ 0.48
Scn2bQ56A07 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.03■□□□□ 0.48
Scn2bQ56A07 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Scn2bQ56A07 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Scn2bQ56A07 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn2bQ56A07 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.03■□□□□ 0.48
Scn2bQ56A07 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn2bQ56A07 Reep4-203ENSMUST00000226563 1444 ntBASIC18.03■□□□□ 0.48
Scn2bQ56A07 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.03■□□□□ 0.48
Scn2bQ56A07 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Scn2bQ56A07 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.02■□□□□ 0.48
Scn2bQ56A07 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn2bQ56A07 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn2bQ56A07 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms