Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ckap2Q3V1H1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ckap2Q3V1H1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ckap2Q3V1H1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ckap2Q3V1H1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ckap2Q3V1H1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ckap2Q3V1H1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21■□□□□ 0.95
Ckap2Q3V1H1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ckap2Q3V1H1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.99■□□□□ 0.95
Ckap2Q3V1H1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ckap2Q3V1H1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ckap2Q3V1H1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ckap2Q3V1H1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.99■□□□□ 0.95
Ckap2Q3V1H1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ckap2Q3V1H1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.99■□□□□ 0.95
Ckap2Q3V1H1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ckap2Q3V1H1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ckap2Q3V1H1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.99■□□□□ 0.95
Ckap2Q3V1H1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ckap2Q3V1H1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ckap2Q3V1H1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ckap2Q3V1H1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ckap2Q3V1H1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ckap2Q3V1H1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ckap2Q3V1H1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Ckap2Q3V1H1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.98■□□□□ 0.95
Ckap2Q3V1H1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ckap2Q3V1H1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.98■□□□□ 0.95
Ckap2Q3V1H1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ckap2Q3V1H1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ckap2Q3V1H1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ckap2Q3V1H1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ckap2Q3V1H1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ckap2Q3V1H1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ckap2Q3V1H1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ckap2Q3V1H1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ckap2Q3V1H1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ckap2Q3V1H1 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.97■□□□□ 0.95
Ckap2Q3V1H1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ckap2Q3V1H1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ckap2Q3V1H1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Ckap2Q3V1H1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ckap2Q3V1H1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ckap2Q3V1H1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ckap2Q3V1H1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ckap2Q3V1H1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ckap2Q3V1H1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.96■□□□□ 0.95
Ckap2Q3V1H1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ckap2Q3V1H1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.96■□□□□ 0.95
Ckap2Q3V1H1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ckap2Q3V1H1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.96■□□□□ 0.95
Ckap2Q3V1H1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ckap2Q3V1H1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ckap2Q3V1H1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ckap2Q3V1H1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.96■□□□□ 0.95
Ckap2Q3V1H1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ckap2Q3V1H1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ckap2Q3V1H1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Ckap2Q3V1H1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ckap2Q3V1H1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ckap2Q3V1H1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ckap2Q3V1H1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ckap2Q3V1H1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ckap2Q3V1H1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ckap2Q3V1H1 Gm38285-201ENSMUST00000192928 922 ntBASIC20.95■□□□□ 0.94
Ckap2Q3V1H1 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.95■□□□□ 0.94
Ckap2Q3V1H1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ckap2Q3V1H1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.95■□□□□ 0.94
Ckap2Q3V1H1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ckap2Q3V1H1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ckap2Q3V1H1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ckap2Q3V1H1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ckap2Q3V1H1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.94■□□□□ 0.94
Ckap2Q3V1H1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ckap2Q3V1H1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ckap2Q3V1H1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.94■□□□□ 0.94
Ckap2Q3V1H1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ckap2Q3V1H1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ckap2Q3V1H1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.94■□□□□ 0.94
Ckap2Q3V1H1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ckap2Q3V1H1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ckap2Q3V1H1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ckap2Q3V1H1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ckap2Q3V1H1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ckap2Q3V1H1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ckap2Q3V1H1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ckap2Q3V1H1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ckap2Q3V1H1 Zfp783-201ENSMUST00000095946 670 ntBASIC20.93■□□□□ 0.94
Ckap2Q3V1H1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ckap2Q3V1H1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ckap2Q3V1H1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ckap2Q3V1H1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ckap2Q3V1H1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ckap2Q3V1H1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Ckap2Q3V1H1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ckap2Q3V1H1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.93■□□□□ 0.94
Ckap2Q3V1H1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ckap2Q3V1H1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap2Q3V1H1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap2Q3V1H1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms