Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Arhgef40Q3UPH7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Arhgef40Q3UPH7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Arhgef40Q3UPH7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Arhgef40Q3UPH7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Arhgef40Q3UPH7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Arhgef40Q3UPH7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Arhgef40Q3UPH7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Arhgef40Q3UPH7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Arhgef40Q3UPH7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Arhgef40Q3UPH7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC27.1■■□□□ 1.93
Arhgef40Q3UPH7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Arhgef40Q3UPH7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Arhgef40Q3UPH7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Arhgef40Q3UPH7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Arhgef40Q3UPH7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Arhgef40Q3UPH7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC27.1■■□□□ 1.93
Arhgef40Q3UPH7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
Arhgef40Q3UPH7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC27.1■■□□□ 1.93
Arhgef40Q3UPH7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Arhgef40Q3UPH7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC27.09■■□□□ 1.93
Arhgef40Q3UPH7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Arhgef40Q3UPH7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC27.09■■□□□ 1.93
Arhgef40Q3UPH7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC27.09■■□□□ 1.93
Arhgef40Q3UPH7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC27.09■■□□□ 1.93
Arhgef40Q3UPH7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
Arhgef40Q3UPH7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Arhgef40Q3UPH7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Arhgef40Q3UPH7 Rncr4-201ENSMUST00000194541 2234 ntBASIC27.08■■□□□ 1.93
Arhgef40Q3UPH7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Arhgef40Q3UPH7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC27.08■■□□□ 1.93
Arhgef40Q3UPH7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC27.08■■□□□ 1.93
Arhgef40Q3UPH7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Arhgef40Q3UPH7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC27.08■■□□□ 1.93
Arhgef40Q3UPH7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC27.08■■□□□ 1.93
Arhgef40Q3UPH7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Arhgef40Q3UPH7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Arhgef40Q3UPH7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Arhgef40Q3UPH7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC27.07■■□□□ 1.92
Arhgef40Q3UPH7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Arhgef40Q3UPH7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Arhgef40Q3UPH7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Arhgef40Q3UPH7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
Arhgef40Q3UPH7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Arhgef40Q3UPH7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Arhgef40Q3UPH7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Arhgef40Q3UPH7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC27.06■■□□□ 1.92
Arhgef40Q3UPH7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC27.06■■□□□ 1.92
Arhgef40Q3UPH7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC27.06■■□□□ 1.92
Arhgef40Q3UPH7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Arhgef40Q3UPH7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC27.06■■□□□ 1.92
Arhgef40Q3UPH7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Arhgef40Q3UPH7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Arhgef40Q3UPH7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Arhgef40Q3UPH7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC27.06■■□□□ 1.92
Arhgef40Q3UPH7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC27.06■■□□□ 1.92
Arhgef40Q3UPH7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Arhgef40Q3UPH7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Arhgef40Q3UPH7 Gm38345-201ENSMUST00000192635 1748 ntBASIC27.05■■□□□ 1.92
Arhgef40Q3UPH7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Arhgef40Q3UPH7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Arhgef40Q3UPH7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Arhgef40Q3UPH7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Arhgef40Q3UPH7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Arhgef40Q3UPH7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC27.05■■□□□ 1.92
Arhgef40Q3UPH7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Arhgef40Q3UPH7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
Arhgef40Q3UPH7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC27.04■■□□□ 1.92
Arhgef40Q3UPH7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Arhgef40Q3UPH7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Arhgef40Q3UPH7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Arhgef40Q3UPH7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Arhgef40Q3UPH7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Arhgef40Q3UPH7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Arhgef40Q3UPH7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Arhgef40Q3UPH7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Arhgef40Q3UPH7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Arhgef40Q3UPH7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Arhgef40Q3UPH7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC27.02■■□□□ 1.92
Arhgef40Q3UPH7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC27.02■■□□□ 1.92
Arhgef40Q3UPH7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC27.02■■□□□ 1.92
Arhgef40Q3UPH7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Arhgef40Q3UPH7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Arhgef40Q3UPH7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Arhgef40Q3UPH7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC27.01■■□□□ 1.91
Arhgef40Q3UPH7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Arhgef40Q3UPH7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Arhgef40Q3UPH7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Arhgef40Q3UPH7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Arhgef40Q3UPH7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Arhgef40Q3UPH7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Arhgef40Q3UPH7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Arhgef40Q3UPH7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Arhgef40Q3UPH7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC27■■□□□ 1.91
Arhgef40Q3UPH7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Arhgef40Q3UPH7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Arhgef40Q3UPH7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Arhgef40Q3UPH7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Arhgef40Q3UPH7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC26.99■■□□□ 1.91
Arhgef40Q3UPH7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms