Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 Gm10698-201ENSMUST00000182663 604 ntBASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lrrc28Q3TX51 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc28Q3TX51 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Lrrc28Q3TX51 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Lrrc28Q3TX51 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc28Q3TX51 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc28Q3TX51 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc28Q3TX51 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Lrrc28Q3TX51 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc28Q3TX51 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc28Q3TX51 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.27■□□□□ 0.36
Lrrc28Q3TX51 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Lrrc28Q3TX51 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Lrrc28Q3TX51 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lrrc28Q3TX51 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lrrc28Q3TX51 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 Gm15378-201ENSMUST00000121894 207 ntBASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrc28Q3TX51 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lrrc28Q3TX51 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lrrc28Q3TX51 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc28Q3TX51 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc28Q3TX51 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Lrrc28Q3TX51 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc28Q3TX51 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc28Q3TX51 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc28Q3TX51 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Lrrc28Q3TX51 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.25■□□□□ 0.35
Lrrc28Q3TX51 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.25■□□□□ 0.35
Lrrc28Q3TX51 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc28Q3TX51 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc28Q3TX51 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc28Q3TX51 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrc28Q3TX51 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.25■□□□□ 0.35
Lrrc28Q3TX51 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lrrc28Q3TX51 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.24■□□□□ 0.35
Lrrc28Q3TX51 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lrrc28Q3TX51 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrrc28Q3TX51 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.24■□□□□ 0.35
Lrrc28Q3TX51 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.24■□□□□ 0.35
Lrrc28Q3TX51 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrrc28Q3TX51 Zfp783-201ENSMUST00000095946 670 ntBASIC17.24■□□□□ 0.35
Lrrc28Q3TX51 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrrc28Q3TX51 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrrc28Q3TX51 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrrc28Q3TX51 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lrrc28Q3TX51 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.24■□□□□ 0.35
Lrrc28Q3TX51 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrc28Q3TX51 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lrrc28Q3TX51 Golph3-205ENSMUST00000228671 2842 ntBASIC17.23■□□□□ 0.35
Lrrc28Q3TX51 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrc28Q3TX51 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrc28Q3TX51 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.23■□□□□ 0.35
Lrrc28Q3TX51 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lrrc28Q3TX51 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.23■□□□□ 0.35
Lrrc28Q3TX51 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.23■□□□□ 0.35
Lrrc28Q3TX51 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrc28Q3TX51 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lrrc28Q3TX51 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrc28Q3TX51 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrc28Q3TX51 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.22■□□□□ 0.35
Lrrc28Q3TX51 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrc28Q3TX51 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Lrrc28Q3TX51 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrc28Q3TX51 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lrrc28Q3TX51 Gm6576-201ENSMUST00000169678 883 ntBASIC17.22■□□□□ 0.35
Lrrc28Q3TX51 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms