Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cul4aQ3TCH7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Cul4aQ3TCH7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Cul4aQ3TCH7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cul4aQ3TCH7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cul4aQ3TCH7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.19■□□□□ 0.66
Cul4aQ3TCH7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cul4aQ3TCH7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cul4aQ3TCH7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cul4aQ3TCH7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cul4aQ3TCH7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cul4aQ3TCH7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cul4aQ3TCH7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cul4aQ3TCH7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.19■□□□□ 0.66
Cul4aQ3TCH7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cul4aQ3TCH7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.18■□□□□ 0.66
Cul4aQ3TCH7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cul4aQ3TCH7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cul4aQ3TCH7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cul4aQ3TCH7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.18■□□□□ 0.66
Cul4aQ3TCH7 Gm13234-201ENSMUST00000120010 747 ntBASIC19.18■□□□□ 0.66
Cul4aQ3TCH7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cul4aQ3TCH7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cul4aQ3TCH7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.18■□□□□ 0.66
Cul4aQ3TCH7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cul4aQ3TCH7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cul4aQ3TCH7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cul4aQ3TCH7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cul4aQ3TCH7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.18■□□□□ 0.66
Cul4aQ3TCH7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cul4aQ3TCH7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cul4aQ3TCH7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cul4aQ3TCH7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cul4aQ3TCH7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.16■□□□□ 0.66
Cul4aQ3TCH7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cul4aQ3TCH7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cul4aQ3TCH7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cul4aQ3TCH7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cul4aQ3TCH7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cul4aQ3TCH7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cul4aQ3TCH7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.16■□□□□ 0.66
Cul4aQ3TCH7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cul4aQ3TCH7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Cul4aQ3TCH7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.14■□□□□ 0.65
Cul4aQ3TCH7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cul4aQ3TCH7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.14■□□□□ 0.65
Cul4aQ3TCH7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cul4aQ3TCH7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cul4aQ3TCH7 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.14■□□□□ 0.65
Cul4aQ3TCH7 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.14■□□□□ 0.65
Cul4aQ3TCH7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cul4aQ3TCH7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.14■□□□□ 0.65
Cul4aQ3TCH7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cul4aQ3TCH7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cul4aQ3TCH7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cul4aQ3TCH7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cul4aQ3TCH7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cul4aQ3TCH7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.13■□□□□ 0.65
Cul4aQ3TCH7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cul4aQ3TCH7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cul4aQ3TCH7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cul4aQ3TCH7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cul4aQ3TCH7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cul4aQ3TCH7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cul4aQ3TCH7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 7.7 ms