Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ptchd3Q0EEE2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptchd3Q0EEE2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ptchd3Q0EEE2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptchd3Q0EEE2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptchd3Q0EEE2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptchd3Q0EEE2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptchd3Q0EEE2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptchd3Q0EEE2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptchd3Q0EEE2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ptchd3Q0EEE2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ptchd3Q0EEE2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptchd3Q0EEE2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptchd3Q0EEE2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ptchd3Q0EEE2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptchd3Q0EEE2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptchd3Q0EEE2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptchd3Q0EEE2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ptchd3Q0EEE2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ptchd3Q0EEE2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptchd3Q0EEE2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptchd3Q0EEE2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptchd3Q0EEE2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.61■□□□□ 0.41
Ptchd3Q0EEE2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptchd3Q0EEE2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ptchd3Q0EEE2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ptchd3Q0EEE2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ptchd3Q0EEE2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ptchd3Q0EEE2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ptchd3Q0EEE2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ptchd3Q0EEE2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ptchd3Q0EEE2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ptchd3Q0EEE2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ptchd3Q0EEE2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.58■□□□□ 0.4
Ptchd3Q0EEE2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ptchd3Q0EEE2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ptchd3Q0EEE2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ptchd3Q0EEE2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ptchd3Q0EEE2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ptchd3Q0EEE2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptchd3Q0EEE2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptchd3Q0EEE2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ptchd3Q0EEE2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ptchd3Q0EEE2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptchd3Q0EEE2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptchd3Q0EEE2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ptchd3Q0EEE2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptchd3Q0EEE2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ptchd3Q0EEE2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptchd3Q0EEE2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptchd3Q0EEE2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptchd3Q0EEE2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Ptchd3Q0EEE2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ptchd3Q0EEE2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptchd3Q0EEE2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ptchd3Q0EEE2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ptchd3Q0EEE2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptchd3Q0EEE2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptchd3Q0EEE2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ptchd3Q0EEE2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms