Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smad4P97471 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smad4P97471 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smad4P97471 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smad4P97471 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smad4P97471 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.38■□□□□ 0.53
Smad4P97471 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smad4P97471 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.38■□□□□ 0.53
Smad4P97471 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smad4P97471 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Smad4P97471 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smad4P97471 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.37■□□□□ 0.53
Smad4P97471 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.37■□□□□ 0.53
Smad4P97471 Gm5587-201ENSMUST00000206270 674 ntBASIC18.37■□□□□ 0.53
Smad4P97471 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smad4P97471 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.37■□□□□ 0.53
Smad4P97471 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smad4P97471 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Smad4P97471 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Smad4P97471 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Smad4P97471 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smad4P97471 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smad4P97471 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.36■□□□□ 0.53
Smad4P97471 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smad4P97471 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smad4P97471 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smad4P97471 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smad4P97471 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smad4P97471 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smad4P97471 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smad4P97471 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.35■□□□□ 0.53
Smad4P97471 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Smad4P97471 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.35■□□□□ 0.53
Smad4P97471 Gm25925-201ENSMUST00000158314 306 ntBASIC18.35■□□□□ 0.53
Smad4P97471 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.35■□□□□ 0.53
Smad4P97471 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smad4P97471 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smad4P97471 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smad4P97471 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Smad4P97471 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smad4P97471 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smad4P97471 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smad4P97471 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smad4P97471 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smad4P97471 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smad4P97471 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.35■□□□□ 0.53
Smad4P97471 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smad4P97471 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smad4P97471 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smad4P97471 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smad4P97471 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smad4P97471 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smad4P97471 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Smad4P97471 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smad4P97471 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Smad4P97471 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smad4P97471 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.34■□□□□ 0.53
Smad4P97471 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smad4P97471 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Smad4P97471 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Smad4P97471 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smad4P97471 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smad4P97471 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smad4P97471 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smad4P97471 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smad4P97471 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.34■□□□□ 0.53
Smad4P97471 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smad4P97471 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Smad4P97471 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Smad4P97471 Gm13474-201ENSMUST00000122466 815 ntBASIC18.33■□□□□ 0.52
Smad4P97471 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.33■□□□□ 0.52
Smad4P97471 Gm9013-201ENSMUST00000132939 882 ntBASIC18.33■□□□□ 0.52
Smad4P97471 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.33■□□□□ 0.52
Smad4P97471 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smad4P97471 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smad4P97471 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smad4P97471 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smad4P97471 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Smad4P97471 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smad4P97471 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Smad4P97471 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smad4P97471 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smad4P97471 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smad4P97471 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.32■□□□□ 0.52
Smad4P97471 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.32■□□□□ 0.52
Smad4P97471 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smad4P97471 Mir2861-201ENSMUST00000175539 82 ntBASIC18.32■□□□□ 0.52
Smad4P97471 Gm27389-201ENSMUST00000183622 195 ntBASIC18.32■□□□□ 0.52
Smad4P97471 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Smad4P97471 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.32■□□□□ 0.52
Smad4P97471 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smad4P97471 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.32■□□□□ 0.52
Smad4P97471 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Smad4P97471 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Smad4P97471 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smad4P97471 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smad4P97471 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.31■□□□□ 0.52
Smad4P97471 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smad4P97471 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smad4P97471 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms