Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrkdcP97313 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrkdcP97313 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PrkdcP97313 Gm11950-201ENSMUST00000121615 838 ntBASIC12.64□□□□□ -0.39
PrkdcP97313 Gm9013-201ENSMUST00000132939 882 ntBASIC12.64□□□□□ -0.39
PrkdcP97313 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.64□□□□□ -0.39
PrkdcP97313 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrkdcP97313 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PrkdcP97313 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PrkdcP97313 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkdcP97313 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkdcP97313 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkdcP97313 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.63□□□□□ -0.39
PrkdcP97313 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.63□□□□□ -0.39
PrkdcP97313 Birc2-201ENSMUST00000054878 378 ntBASIC12.63□□□□□ -0.39
PrkdcP97313 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
PrkdcP97313 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PrkdcP97313 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkdcP97313 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkdcP97313 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrkdcP97313 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkdcP97313 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
PrkdcP97313 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
PrkdcP97313 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkdcP97313 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkdcP97313 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkdcP97313 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkdcP97313 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkdcP97313 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
PrkdcP97313 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkdcP97313 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.62□□□□□ -0.39
PrkdcP97313 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkdcP97313 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrkdcP97313 Gm37352-201ENSMUST00000193908 2181 ntBASIC12.62□□□□□ -0.39
PrkdcP97313 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PrkdcP97313 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PrkdcP97313 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PrkdcP97313 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
PrkdcP97313 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
PrkdcP97313 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrkdcP97313 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrkdcP97313 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC12.61□□□□□ -0.39
PrkdcP97313 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrkdcP97313 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
PrkdcP97313 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC12.61□□□□□ -0.39
PrkdcP97313 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.61□□□□□ -0.39
PrkdcP97313 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
PrkdcP97313 Gm7063-201ENSMUST00000186840 981 ntBASIC12.61□□□□□ -0.39
PrkdcP97313 Gm37935-201ENSMUST00000192012 982 ntBASIC12.61□□□□□ -0.39
PrkdcP97313 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrkdcP97313 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
PrkdcP97313 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrkdcP97313 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PrkdcP97313 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PrkdcP97313 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrkdcP97313 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PrkdcP97313 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrkdcP97313 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.6□□□□□ -0.39
PrkdcP97313 Gm28659-201ENSMUST00000188013 759 ntBASIC12.6□□□□□ -0.39
PrkdcP97313 Gm10566-201ENSMUST00000086739 996 ntBASIC12.6□□□□□ -0.39
PrkdcP97313 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
PrkdcP97313 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrkdcP97313 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PrkdcP97313 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PrkdcP97313 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PrkdcP97313 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.6□□□□□ -0.39
PrkdcP97313 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
PrkdcP97313 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrkdcP97313 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrkdcP97313 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
PrkdcP97313 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PrkdcP97313 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrkdcP97313 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrkdcP97313 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC12.6□□□□□ -0.39
PrkdcP97313 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PrkdcP97313 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PrkdcP97313 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PrkdcP97313 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PrkdcP97313 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
PrkdcP97313 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.59□□□□□ -0.39
PrkdcP97313 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.59□□□□□ -0.39
PrkdcP97313 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
PrkdcP97313 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
PrkdcP97313 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
PrkdcP97313 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PrkdcP97313 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
PrkdcP97313 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PrkdcP97313 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PrkdcP97313 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PrkdcP97313 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PrkdcP97313 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PrkdcP97313 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
PrkdcP97313 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PrkdcP97313 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.59□□□□□ -0.39
PrkdcP97313 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrkdcP97313 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PrkdcP97313 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.58□□□□□ -0.4
PrkdcP97313 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PrkdcP97313 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PrkdcP97313 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms