Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfn1P62962 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfn1P62962 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pfn1P62962 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.18□□□□□ -0.14
Pfn1P62962 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfn1P62962 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfn1P62962 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfn1P62962 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pfn1P62962 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pfn1P62962 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.17□□□□□ -0.14
Pfn1P62962 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfn1P62962 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfn1P62962 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfn1P62962 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pfn1P62962 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfn1P62962 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfn1P62962 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfn1P62962 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.17□□□□□ -0.14
Pfn1P62962 Gm5812-201ENSMUST00000061073 957 ntBASIC14.17□□□□□ -0.14
Pfn1P62962 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfn1P62962 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfn1P62962 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfn1P62962 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfn1P62962 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pfn1P62962 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfn1P62962 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfn1P62962 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pfn1P62962 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfn1P62962 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pfn1P62962 Gm15546-201ENSMUST00000122095 826 ntBASIC14.16□□□□□ -0.14
Pfn1P62962 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pfn1P62962 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.16□□□□□ -0.14
Pfn1P62962 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfn1P62962 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfn1P62962 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pfn1P62962 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfn1P62962 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pfn1P62962 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pfn1P62962 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.16□□□□□ -0.14
Pfn1P62962 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pfn1P62962 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pfn1P62962 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pfn1P62962 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pfn1P62962 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfn1P62962 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pfn1P62962 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfn1P62962 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.15□□□□□ -0.14
Pfn1P62962 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfn1P62962 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.15□□□□□ -0.14
Pfn1P62962 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfn1P62962 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfn1P62962 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfn1P62962 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfn1P62962 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfn1P62962 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pfn1P62962 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pfn1P62962 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
Pfn1P62962 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pfn1P62962 Haglr-201ENSMUST00000100000 2085 ntBASIC14.14□□□□□ -0.15
Pfn1P62962 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfn1P62962 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfn1P62962 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfn1P62962 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfn1P62962 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfn1P62962 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pfn1P62962 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.14□□□□□ -0.15
Pfn1P62962 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.14□□□□□ -0.15
Pfn1P62962 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
Pfn1P62962 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Pfn1P62962 Gm22238-201ENSMUST00000175222 88 ntBASIC14.14□□□□□ -0.15
Pfn1P62962 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfn1P62962 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfn1P62962 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfn1P62962 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pfn1P62962 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pfn1P62962 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pfn1P62962 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pfn1P62962 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfn1P62962 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfn1P62962 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Pfn1P62962 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pfn1P62962 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.13□□□□□ -0.15
Pfn1P62962 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfn1P62962 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.13□□□□□ -0.15
Pfn1P62962 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pfn1P62962 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pfn1P62962 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pfn1P62962 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.13□□□□□ -0.15
Pfn1P62962 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfn1P62962 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pfn1P62962 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfn1P62962 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pfn1P62962 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfn1P62962 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfn1P62962 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfn1P62962 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfn1P62962 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pfn1P62962 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.13□□□□□ -0.15
Pfn1P62962 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pfn1P62962 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms