Protein–RNA interactions for Protein: P60897

Sem1, 26S proteasome complex subunit SEM1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sem1P60897 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sem1P60897 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sem1P60897 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sem1P60897 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sem1P60897 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sem1P60897 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sem1P60897 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.35■□□□□ 0.37
Sem1P60897 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.35■□□□□ 0.37
Sem1P60897 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sem1P60897 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sem1P60897 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sem1P60897 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sem1P60897 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sem1P60897 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sem1P60897 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sem1P60897 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sem1P60897 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sem1P60897 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sem1P60897 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.34■□□□□ 0.37
Sem1P60897 Gm8969-201ENSMUST00000199694 526 ntBASIC17.34■□□□□ 0.37
Sem1P60897 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sem1P60897 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sem1P60897 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sem1P60897 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sem1P60897 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sem1P60897 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sem1P60897 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Sem1P60897 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sem1P60897 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sem1P60897 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sem1P60897 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sem1P60897 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sem1P60897 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sem1P60897 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.33■□□□□ 0.36
Sem1P60897 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sem1P60897 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.33■□□□□ 0.36
Sem1P60897 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sem1P60897 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sem1P60897 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Sem1P60897 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sem1P60897 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sem1P60897 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sem1P60897 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.33■□□□□ 0.36
Sem1P60897 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sem1P60897 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sem1P60897 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.32■□□□□ 0.36
Sem1P60897 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sem1P60897 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.32■□□□□ 0.36
Sem1P60897 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sem1P60897 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sem1P60897 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sem1P60897 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sem1P60897 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sem1P60897 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sem1P60897 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.32■□□□□ 0.36
Sem1P60897 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sem1P60897 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sem1P60897 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sem1P60897 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sem1P60897 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sem1P60897 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sem1P60897 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sem1P60897 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sem1P60897 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sem1P60897 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sem1P60897 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sem1P60897 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Sem1P60897 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sem1P60897 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sem1P60897 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Sem1P60897 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sem1P60897 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sem1P60897 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sem1P60897 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sem1P60897 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sem1P60897 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sem1P60897 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sem1P60897 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sem1P60897 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sem1P60897 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Sem1P60897 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sem1P60897 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sem1P60897 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sem1P60897 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sem1P60897 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.3■□□□□ 0.36
Sem1P60897 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.3■□□□□ 0.36
Sem1P60897 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sem1P60897 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sem1P60897 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sem1P60897 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sem1P60897 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.29■□□□□ 0.36
Sem1P60897 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sem1P60897 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.29■□□□□ 0.36
Sem1P60897 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sem1P60897 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sem1P60897 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sem1P60897 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sem1P60897 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sem1P60897 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sem1P60897 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms