Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tpm1P58771 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Tpm1P58771 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tpm1P58771 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tpm1P58771 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tpm1P58771 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.36■□□□□ 0.85
Tpm1P58771 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tpm1P58771 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tpm1P58771 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tpm1P58771 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.36■□□□□ 0.85
Tpm1P58771 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tpm1P58771 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Tpm1P58771 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tpm1P58771 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tpm1P58771 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tpm1P58771 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tpm1P58771 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tpm1P58771 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tpm1P58771 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tpm1P58771 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tpm1P58771 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tpm1P58771 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tpm1P58771 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tpm1P58771 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tpm1P58771 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tpm1P58771 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.35■□□□□ 0.85
Tpm1P58771 Gm43137-201ENSMUST00000198052 594 ntBASIC20.35■□□□□ 0.85
Tpm1P58771 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tpm1P58771 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tpm1P58771 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tpm1P58771 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tpm1P58771 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tpm1P58771 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tpm1P58771 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tpm1P58771 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.34■□□□□ 0.85
Tpm1P58771 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tpm1P58771 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tpm1P58771 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tpm1P58771 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tpm1P58771 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tpm1P58771 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tpm1P58771 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tpm1P58771 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tpm1P58771 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tpm1P58771 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tpm1P58771 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tpm1P58771 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tpm1P58771 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tpm1P58771 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tpm1P58771 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tpm1P58771 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.33■□□□□ 0.84
Tpm1P58771 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.32■□□□□ 0.84
Tpm1P58771 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tpm1P58771 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tpm1P58771 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Tpm1P58771 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tpm1P58771 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Tpm1P58771 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.32■□□□□ 0.84
Tpm1P58771 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tpm1P58771 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tpm1P58771 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tpm1P58771 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.32■□□□□ 0.84
Tpm1P58771 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tpm1P58771 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.32■□□□□ 0.84
Tpm1P58771 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tpm1P58771 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tpm1P58771 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tpm1P58771 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tpm1P58771 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tpm1P58771 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tpm1P58771 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Tpm1P58771 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tpm1P58771 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tpm1P58771 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.31■□□□□ 0.84
Tpm1P58771 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tpm1P58771 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tpm1P58771 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tpm1P58771 Gm11421-201ENSMUST00000122124 294 ntBASIC20.31■□□□□ 0.84
Tpm1P58771 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tpm1P58771 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tpm1P58771 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Tpm1P58771 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tpm1P58771 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tpm1P58771 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tpm1P58771 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tpm1P58771 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Tpm1P58771 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tpm1P58771 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tpm1P58771 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tpm1P58771 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tpm1P58771 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tpm1P58771 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.3■□□□□ 0.84
Tpm1P58771 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.3■□□□□ 0.84
Tpm1P58771 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tpm1P58771 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Tpm1P58771 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tpm1P58771 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tpm1P58771 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tpm1P58771 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.3■□□□□ 0.84
Tpm1P58771 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms