Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Gm43592-201ENSMUST00000196922 1165 ntBASIC14.35□□□□□ -0.11
Ctdsp1P58466 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ctdsp1P58466 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ctdsp1P58466 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Haglr-201ENSMUST00000100000 2085 ntBASIC14.34□□□□□ -0.11
Ctdsp1P58466 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.34□□□□□ -0.11
Ctdsp1P58466 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ctdsp1P58466 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ctdsp1P58466 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdsp1P58466 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdsp1P58466 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdsp1P58466 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdsp1P58466 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdsp1P58466 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdsp1P58466 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdsp1P58466 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdsp1P58466 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdsp1P58466 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdsp1P58466 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdsp1P58466 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdsp1P58466 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.33□□□□□ -0.12
Ctdsp1P58466 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ctdsp1P58466 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ctdsp1P58466 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ctdsp1P58466 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ctdsp1P58466 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Gm11687-201ENSMUST00000118911 886 ntBASIC14.31□□□□□ -0.12
Ctdsp1P58466 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ctdsp1P58466 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms