Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sssca1P56873 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sssca1P56873 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sssca1P56873 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Sssca1P56873 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sssca1P56873 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sssca1P56873 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.75□□□□□ -0.05
Sssca1P56873 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Sssca1P56873 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Sssca1P56873 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sssca1P56873 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Sssca1P56873 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Sssca1P56873 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sssca1P56873 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sssca1P56873 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sssca1P56873 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sssca1P56873 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sssca1P56873 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Sssca1P56873 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sssca1P56873 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sssca1P56873 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sssca1P56873 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sssca1P56873 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sssca1P56873 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.74□□□□□ -0.05
Sssca1P56873 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sssca1P56873 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sssca1P56873 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sssca1P56873 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sssca1P56873 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sssca1P56873 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sssca1P56873 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sssca1P56873 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sssca1P56873 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sssca1P56873 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.74□□□□□ -0.05
Sssca1P56873 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sssca1P56873 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Sssca1P56873 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.73□□□□□ -0.05
Sssca1P56873 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.73□□□□□ -0.05
Sssca1P56873 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sssca1P56873 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.73□□□□□ -0.05
Sssca1P56873 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sssca1P56873 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sssca1P56873 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sssca1P56873 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sssca1P56873 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sssca1P56873 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Sssca1P56873 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sssca1P56873 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Sssca1P56873 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sssca1P56873 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sssca1P56873 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Sssca1P56873 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Sssca1P56873 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sssca1P56873 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
Sssca1P56873 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sssca1P56873 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Sssca1P56873 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.72□□□□□ -0.05
Sssca1P56873 Gm8493-201ENSMUST00000196881 489 ntBASIC14.72□□□□□ -0.05
Sssca1P56873 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sssca1P56873 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sssca1P56873 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sssca1P56873 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sssca1P56873 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.72□□□□□ -0.05
Sssca1P56873 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sssca1P56873 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.72□□□□□ -0.05
Sssca1P56873 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sssca1P56873 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sssca1P56873 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sssca1P56873 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sssca1P56873 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sssca1P56873 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sssca1P56873 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sssca1P56873 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sssca1P56873 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sssca1P56873 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Sssca1P56873 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sssca1P56873 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Sssca1P56873 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sssca1P56873 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sssca1P56873 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sssca1P56873 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms